PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021659052.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

bHLH

Protein Properties

Length: 438aa MW: 48782.8 Da PI: 6.3778

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021659052.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	30.7	5.8e-10	234	281	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq XP_021659052.1 234 SHSLAERVRREKISERMKYLQDLVPGC----NKITGKAGMLDEIINYVQSLQ 281 8************************....999***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 438 aa Download sequence
MNRALLPEML HCTDMTVPEK QRARFKWQPE QQQQQPQDSF FGDLSGVFHL QQHQLQGFQG 60 DLGEVVTRSV KPDPALMDNG WPDLVGFGPC GYGNNNGSGF DINYAISRTS SCPPAVAEAA 120 VDAAVLANGR EPVVSEKLSS GVGRESLKKR KIDKVQNNTK VVAEDDSRDK RIKGCGEEGE 180 SKFIEKNNNK SSTTSKNSNK ENSAETSKDN SKVTEVQKPE YIHVRVRRGQ ATDSHSLAER 240 VRREKISERM KYLQDLVPGC NKITGKAGML DEIINYVQSL QRQVEFLSMK LAAVNPRLDF 300 NIDNLFSKEQ AFPGCATNFP AIGMSSDMTN PAYLQFNPVQ QQQRQQQQQP QQQLVTCCGL 360 DMGINPPDMG LRRTISAPVS IPEMFIESSC FNQIQASSTW DADLQNLYNV AFDQGRSTSF 420 PPQPFTGTIE ASNLKMEM

Sequence ? help Back to Top

Protein Sequence Length: 438 aa Download sequence

MNRALLPEML HCTDMTVPEK QRARFKWQPE QQQQQPQDSF FGDLSGVFHL QQHQLQGFQG  60
DLGEVVTRSV KPDPALMDNG WPDLVGFGPC GYGNNNGSGF DINYAISRTS SCPPAVAEAA  120
VDAAVLANGR EPVVSEKLSS GVGRESLKKR KIDKVQNNTK VVAEDDSRDK RIKGCGEEGE  180
SKFIEKNNNK SSTTSKNSNK ENSAETSKDN SKVTEVQKPE YIHVRVRRGQ ATDSHSLAER  240
VRREKISERM KYLQDLVPGC NKITGKAGML DEIINYVQSL QRQVEFLSMK LAAVNPRLDF  300
NIDNLFSKEQ AFPGCATNFP AIGMSSDMTN PAYLQFNPVQ QQQRQQQQQP QQQLVTCCGL  360
DMGINPPDMG LRRTISAPVS IPEMFIESSC FNQIQASSTW DADLQNLYNV AFDQGRSTSF  420
PPQPFTGTIE ASNLKMEM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G34530.1	1e-60	bHLH family protein