PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021659141.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family Whirly
Protein Properties Length: 220aa    MW: 24352 Da    PI: 10.2463
Description Whirly family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021659141.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Whirly197.81.5e-61451802137
          Whirly   2 vyktkaalkvkavrptfealdsgnlklkraGglllelanataerkydWekkqsfalsatevaelvdlaskesceffhdpaakgsneGkvrkalkv 96 
                     v+k+kaal+v++v ptf++l+sgn++++r+G ++l++++a++erkyd+ek+q+falsatev++l++l++k+s+effhdp++ +sn+G+vrk+l++
  XP_021659141.1  45 VFKGKAALSVEPVPPTFTKLNSGNVRVERRGIMMLTFMPAIGERKYDYEKRQHFALSATEVGSLISLGPKDSSEFFHDPSMLSSNAGQVRKSLSI 139
                     9********************************************************************************************** PP

          Whirly  97 ePlpdGsGlfvnlsvtnslvkgnesfsvPvskaefavlrsl 137
                     +P +dG G+fv+lsv n+++++ne+f vP++ +efavl+++
  XP_021659141.1 140 KPQADGGGYFVSLSVVNNILRTNERFNVPLTAGEFAVLKTA 180
                     ***************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    
MMKLSRLLQQ SRDASRLHAL TFQAGISTAR QDLTANERIY APYCVFKGKA ALSVEPVPPT  60
FTKLNSGNVR VERRGIMMLT FMPAIGERKY DYEKRQHFAL SATEVGSLIS LGPKDSSEFF  120
HDPSMLSSNA GQVRKSLSIK PQADGGGYFV SLSVVNNILR TNERFNVPLT AGEFAVLKTA  180
CSFALPHIMG WDRLTAKLPK ESVGSPSKAN RQEPDLEWAK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71260.11e-92Whirly family protein