PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021659142.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family Whirly
Protein Properties Length: 159aa    MW: 17581.2 Da    PI: 10.3682
Description Whirly family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021659142.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Whirly162.89.6e-51451532110
          Whirly   2 vyktkaalkvkavrptfealdsgnlklkraGglllelanataerkydWekkqsfalsatevaelvdlaskesceffhdpaakgsneGkvrkalkv 96 
                     v+k+kaal+v++v ptf++l+sgn++++r+G ++l++++a++erkyd+ek+q+falsatev++l++l++k+s+effhdp++ +sn+G+vrk+l++
  XP_021659142.1  45 VFKGKAALSVEPVPPTFTKLNSGNVRVERRGIMMLTFMPAIGERKYDYEKRQHFALSATEVGSLISLGPKDSSEFFHDPSMLSSNAGQVRKSLSI 139
                     9********************************************************************************************** PP

          Whirly  97 ePlpdGsGlfvnls 110
                     +P +dG G+fv+ls
  XP_021659142.1 140 KPQADGGGYFVSLS 153
                     ************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 159 aa     Download sequence    
MMKLSRLLQQ SRDASRLHAL TFQAGISTAR QDLTANERIY APYCVFKGKA ALSVEPVPPT  60
FTKLNSGNVR VERRGIMMLT FMPAIGERKY DYEKRQHFAL SATEVGSLIS LGPKDSSEFF  120
HDPSMLSSNA GQVRKSLSIK PQADGGGYFV SLSKLSFLS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71260.11e-66Whirly family protein