PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021659462.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

C2H2

Protein Properties

Length: 363aa MW: 40766.4 Da PI: 6.7761

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021659462.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.4	0.00049	286	308	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C +C+k F + + ++H +++ XP_021659462.1 286 FMCRKCSKAFAVRGDWRTHEKNC 308 89*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 363 aa Download sequence
MADPYSNFFT GWFKFDNNPL HPHSPSLNPT PAATTTPQLS YTYHNLYTNP FTLNQNQAPY 60 FHYQNPPPSP PLREALPLLS LSPSRDDKDQ EQEGEDENQE QVSCTAMDVD KINNINKAKD 120 HGSFFSSSAG SDTNEDETVT VALHIGLPSP SAAEMASVLS SSSEVTDKDG DGDDSGFPVS 180 RLNKGQYWIP TPTQILIGPT QFSCPVCCKT FNRYNNMQMH MWGHGSQYRK GPESLRGTQP 240 TGMLRLPCYC CAPGCRNNID HPRAKPLKDF RTLQTHYRRK HGIKPFMCRK CSKAFAVRGD 300 WRTHEKNCGK LWYCICGSDF KHKRSLKDHI KAFGNGHAAY GIAGFEEEDE PASEVEQDNE 360 SMQ

Sequence ? help Back to Top

Protein Sequence Length: 363 aa Download sequence

MADPYSNFFT GWFKFDNNPL HPHSPSLNPT PAATTTPQLS YTYHNLYTNP FTLNQNQAPY  60
FHYQNPPPSP PLREALPLLS LSPSRDDKDQ EQEGEDENQE QVSCTAMDVD KINNINKAKD  120
HGSFFSSSAG SDTNEDETVT VALHIGLPSP SAAEMASVLS SSSEVTDKDG DGDDSGFPVS  180
RLNKGQYWIP TPTQILIGPT QFSCPVCCKT FNRYNNMQMH MWGHGSQYRK GPESLRGTQP  240
TGMLRLPCYC CAPGCRNNID HPRAKPLKDF RTLQTHYRRK HGIKPFMCRK CSKAFAVRGD  300
WRTHEKNCGK LWYCICGSDF KHKRSLKDHI KAFGNGHAAY GIAGFEEEDE PASEVEQDNE  360
SMQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57670.1	1e-143	C2H2 family protein