PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021659527.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

C2H2

Protein Properties

Length: 352aa MW: 40097.5 Da PI: 8.5858

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021659527.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.9	8.7e-06	191	210	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++C++C+k+F+r n++ H+ XP_021659527.1 191 FECSICNKTFNRYNNMQMHM 210 89*****************9 PP
2	zf-C2H2	16	3.4e-05	275	297	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C +Cgk+F k + ++H +++ XP_021659527.1 275 FMCRKCGKTFAVKGDWRTHEKNC 297 89*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 352 aa Download sequence
MGLWNYHLED NNLCFQAPTF IEWLKPYSSP SSSSSSSSSL TSSSSSSSSS VTQQVQLTNP 60 MSILKLPLLY PQQQQQHQQP EFVKETIQCL PLLSRLTENK ALKEENMGVQ ETSFGLKEEK 120 IDKVTVALHI GLPNSSGDSQ VETKVFDLKE QQQQQQPPPI KKSFQGHCSF NTESRFWIPT 180 PAQILVGPMQ FECSICNKTF NRYNNMQMHM WGHGSEFRRG PDSLKGTQPA AMLRLPCYCC 240 AQGCKNNINH PRAKPLKDFR TLQTHYKRKH GAKPFMCRKC GKTFAVKGDW RTHEKNCGKL 300 WYCTCGSDFK HKRSLKDHIR SFGKGHSPHP SLEGFEDDKE CITGSEEEEF VH

Sequence ? help Back to Top

Protein Sequence Length: 352 aa Download sequence

MGLWNYHLED NNLCFQAPTF IEWLKPYSSP SSSSSSSSSL TSSSSSSSSS VTQQVQLTNP  60
MSILKLPLLY PQQQQQHQQP EFVKETIQCL PLLSRLTENK ALKEENMGVQ ETSFGLKEEK  120
IDKVTVALHI GLPNSSGDSQ VETKVFDLKE QQQQQQPPPI KKSFQGHCSF NTESRFWIPT  180
PAQILVGPMQ FECSICNKTF NRYNNMQMHM WGHGSEFRRG PDSLKGTQPA AMLRLPCYCC  240
AQGCKNNINH PRAKPLKDFR TLQTHYKRKH GAKPFMCRKC GKTFAVKGDW RTHEKNCGKL  300
WYCTCGSDFK HKRSLKDHIR SFGKGHSPHP SLEGFEDDKE CITGSEEEEF VH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08290.1	1e-123	C2H2 family protein