PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021659562.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family BBR-BPC
Protein Properties Length: 315aa    MW: 34898.5 Da    PI: 9.8733
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021659562.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind358.81.1e-10913151301
       GAGA_bind   1 mdddgsre..rnkg.yye................paaslkenlglqlmssiaerdakirernlalsekkaavaerdmaflqrdkalaernkalve 76 
                     mdd g+++  r k  yy+                ++++l   +++++m+++aerd++i+ern+al+ekk+a+a+rd+a+++r+kalaer+kal+e
  XP_021659562.1   1 MDDGGQHHsgRYKIdYYKsanspwslmppphlkeQNNALV--MNKKIMAILAERDTAIQERNMALAEKKEALAARDEALHEREKALAERDKALME 93 
                     89988877788888899999***99998877753335555..99*************************************************** PP

       GAGA_bind  77 rdnkllalllvenslasalpvgvqvlsgtksidslqqlsepqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkks 171
                     rdn+l+a++++en+   + pvg +  +g+k i +     +++   +a +  e+++++a+pi++   e+ + +++k+++++k + +k +k+++k +
  XP_021659562.1  94 RDNALAAIQYRENG--VNFPVGNGNQRGSKRIPHPVY--NSNAVAEALNSGEMHITDAFPITTVSAESLKPRQTKRTKESKPASSKATKSPRKGN 184
                     *************9..5678899999******97766..566666778889************99999999998866655544444444444433 PP

       GAGA_bind 172 ekskkkvkkesad.erskaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgaf 265
                     ++ ++ +++  +d ++ kae++s+d +ln vs+De+t+PvPvCsCtG+++qCYkWGnGGWqS+CCttt+S yPLP+++++r+aR++grKmS+++f
  XP_021659562.1 185 KVGEDLNRQGASDgKKIKAEWDSQDAGLNLVSFDETTMPVPVCSCTGVPHQCYKWGNGGWQSSCCTTTLSSYPLPQMPNKRHARVGGRKMSGSVF 279
                     3333333333333588******************************************************************************* PP

       GAGA_bind 266 kklLekLaaeGydlsnpvDLkdhWAkHGtnkfvtir 301
                     +klL++LaaeG+dls p+DLkd+WA+HGtn+++ti+
  XP_021659562.1 280 TKLLSRLAAEGHDLSVPLDLKDYWARHGTNRYITIK 315
                     ***********************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    
MDDGGQHHSG RYKIDYYKSA NSPWSLMPPP HLKEQNNALV MNKKIMAILA ERDTAIQERN  60
MALAEKKEAL AARDEALHER EKALAERDKA LMERDNALAA IQYRENGVNF PVGNGNQRGS  120
KRIPHPVYNS NAVAEALNSG EMHITDAFPI TTVSAESLKP RQTKRTKESK PASSKATKSP  180
RKGNKVGEDL NRQGASDGKK IKAEWDSQDA GLNLVSFDET TMPVPVCSCT GVPHQCYKWG  240
NGGWQSSCCT TTLSSYPLPQ MPNKRHARVG GRKMSGSVFT KLLSRLAAEG HDLSVPLDLK  300
DYWARHGTNR YITIK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G21240.11e-129BBR-BPC family protein