PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021659608.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family M-type_MADS
Protein Properties Length: 149aa    MW: 16778.6 Da    PI: 9.975
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021659608.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF89.81.5e-281059251
                    ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    ri+n++ rqvtfskRr g+lKKA ELS+LCdaev viifsstgkly+y+s
  XP_021659608.1 10 RIDNSTSRQVTFSKRRSGLLKKARELSILCDAEVGVIIFSSTGKLYDYAS 59
                    8***********************************************86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 149 aa     Download sequence    
MGRGKIVIRR IDNSTSRQVT FSKRRSGLLK KARELSILCD AEVGVIIFSS TGKLYDYAST  60
SMNSVIERYN KLKEEQNQLM NPASEIKVLF HQAHGNLCNA ISFNHLVHKI SDLTQHLCYI  120
QIHHPILHLV LAKGGCKLEE GVAILTRIP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G14210.12e-49MIKC_MADS family protein