PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021659661.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

bHLH

Protein Properties

Length: 439aa MW: 48931.1 Da PI: 7.9543

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021659661.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	35.7	1.5e-11	367	412	6	55
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++Er RR ri +++ +L++l P+ +k + a++L +AveYIk+Lq XP_021659661.1 367 SIAERVRRTRISERMRKLQDLFPNM----DKQTNTADMLDLAVEYIKDLQ 412 689*******************7....688***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 439 aa Download sequence
MMYGILGGFQ GPSRQEDMSL LYSPSFNYQD GELRRTQEHM DLNHHHYHQE QHQHNSGLMR 60 YRSAPSSFLD SLVNGTSGHG GDGGGIEGEN YRYFRSSSPE MDTMLARYMS TLSGSEDSNS 120 RNLQEFEEKP AMKREMEDSQ MVYQSLPVND LTNNGNSLNV SNSLDNTYGV MNSMALKNSM 180 QASKMSTVNG SNLVRQNSSP AVFFSNLGVD NGFTVTKDTG SFRACNGLNG DASLSTSRLN 240 NHLSFPSGQR FLPRIAEIGD ENPGASSTEG NTGKRQYMNF ANDSWDDSSS NDFKRLRSND 300 GNVFSGFNIL DNQNGNSGNR MTGLTHHLSL PKTASEMATI EKFLQFQGSS VPCKIRAKRG 360 CATHPRSIAE RVRRTRISER MRKLQDLFPN MDKQTNTADM LDLAVEYIKD LQKQVKTLTD 420 TRAKCTCSSK QKQYSNVSA

Sequence ? help Back to Top

Protein Sequence Length: 439 aa Download sequence

MMYGILGGFQ GPSRQEDMSL LYSPSFNYQD GELRRTQEHM DLNHHHYHQE QHQHNSGLMR  60
YRSAPSSFLD SLVNGTSGHG GDGGGIEGEN YRYFRSSSPE MDTMLARYMS TLSGSEDSNS  120
RNLQEFEEKP AMKREMEDSQ MVYQSLPVND LTNNGNSLNV SNSLDNTYGV MNSMALKNSM  180
QASKMSTVNG SNLVRQNSSP AVFFSNLGVD NGFTVTKDTG SFRACNGLNG DASLSTSRLN  240
NHLSFPSGQR FLPRIAEIGD ENPGASSTEG NTGKRQYMNF ANDSWDDSSS NDFKRLRSND  300
GNVFSGFNIL DNQNGNSGNR MTGLTHHLSL PKTASEMATI EKFLQFQGSS VPCKIRAKRG  360
CATHPRSIAE RVRRTRISER MRKLQDLFPN MDKQTNTADM LDLAVEYIKD LQKQVKTLTD  420
TRAKCTCSSK QKQYSNVSA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42280.1	5e-68	bHLH family protein