PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021660016.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family MYB
Protein Properties Length: 314aa    MW: 36053.4 Da    PI: 6.2508
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021660016.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding55.21.6e-172572148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg+WT eEd ll ++++++G g+W+  a++ g++Rt+k+c++rw++yl
   XP_021660016.1 25 RGPWTLEEDTLLTHYIARHGEGRWNMLANYAGLKRTGKSCRLRWLNYL 72
                     89********************************************97 PP
2Myb_DNA-binding52.61.1e-1678121146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg+ T++E++l+++++ ++G++ W++Ia++++ gRt++++k++w++
   XP_021660016.1  78 RGNLTPQEQLLILELHSKWGNR-WSKIAQHLP-GRTDNEIKNYWRT 121
                      7999******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    
MHSMRAPSVT KRMCNSREKE SELRRGPWTL EEDTLLTHYI ARHGEGRWNM LANYAGLKRT  60
GKSCRLRWLN YLKPDIKRGN LTPQEQLLIL ELHSKWGNRW SKIAQHLPGR TDNEIKNYWR  120
TRVQRQARQL NIESNSKNFL DAVRCFWMPR LIQKVEQNCC SSPLPTLDSQ TQAIASESSP  180
NFTVANSFSS ETCPPQNKLA QYSNLASENS SSVTSANVLS TDFLPISHQP EIVENPASSC  240
PPLLDNTVYN NLPLSDSYYV ENSGYDMDGF NPAYMPEIDT FGDSTSECKM AEGNWVFDDD  300
MAYTLWNMND IWQF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68320.11e-93MYB family protein