PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021660017.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

bHLH

Protein Properties

Length: 239aa MW: 27031.4 Da PI: 7.2725

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021660017.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	28.6	2.5e-09	131	178	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++iN+++ L++l+P + k + a +L ++Y++sLq XP_021660017.1 131 SHSLAERVRREKINEKLRHLKDLVPGC----YKTMGMAVMLDVIINYVQSLQ 178 8*************************8....355888888888888888887 PP

Sequence ? help Back to Top
Protein Sequence Length: 239 aa Download sequence
MAHEFTGKLQ NLKPSFSGIN PSSWPLIGNI NQRALENFSS TGDQDQFVAF SNGGSFSNHQ 60 QQPHLPMNFA TNIQSLLHVS PPPPAAVSGT EQSENIENFG GRKRKRKDEK DLQKPTEVVH 120 VRAKRGHATD SHSLAERVRR EKINEKLRHL KDLVPGCYKT MGMAVMLDVI INYVQSLQNQ 180 IEFLSMKLSA ASMYYDFNLE KDNIETIQGP NAYEVQEMEK IGREGYGEPC NYFNSAWPF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	102	107	RKRKRK
2	102	108	RKRKRKD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25330.1	9e-56	bHLH family protein