PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021660127.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB_related

Protein Properties

Length: 580aa MW: 62172.5 Da PI: 5.8755

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021660127.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	24.2	7.7e-08	203	247	1	44
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.TTS-HHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg.kgRtlkqcksrw 44 r++W + Ed +l+ av+++G g+W+ I r Rt+ q+ rw XP_021660127.1 203 RKPWLESEDMKLIAAVQKYGEGNWANILRSEFkWDRTASQLSQRW 247 789************************986554556666666666 PP

Sequence ? help Back to Top
Protein Sequence Length: 580 aa Download sequence
MIEKSKKQKK GIISEEDIST LLQRYTANTV LALLQEVAQF QSAKIDWNAL VKTTTTGISN 60 AREYQLLWRH LAYRHALFEK LEDGAQPLDD DSDLEYELQA FPDVSTEAST EAAACVKVLI 120 ASGLPSDSIH PNSTTVEAPL TINIPNGQAV RSTSENLQPA TMRGMNITVP VSVQKQPLPA 180 VTSTDRLDAN GSASGTIPAR RKRKPWLESE DMKLIAAVQK YGEGNWANIL RSEFKWDRTA 240 SQLSQRWAII RKRRLGNWNL GGNTSGVQLT EAQRAALHAM NLALDPPVKN TFANNSVRPL 300 ANSQVAVNKP LKPDLSSNPV RAAAVAAGAR VATQSDAASL LKAARAKNVV HIMPASSSSI 360 TSLPGGASSH SDALPNVHLN DQAAASFSTH PVLASKKASS PTTQPTPISD AAMNMSSEQA 420 NAELSSKQDT ETTGEIKFLS EDVTKVQVQE HQGFVSGNDP GELVQEEKAA LPKQAVEFKT 480 QVAVAQCSNA SLEVNMGESD MVDVHGNQAE GSQNSNGEKV MSLSSVGKNE NQSAVQENGD 540 NKTTSIKQVD IQSVATDKCS EKFEAVSKAE PCNVMTEGEG

Sequence ? help Back to Top

Protein Sequence Length: 580 aa Download sequence

MIEKSKKQKK GIISEEDIST LLQRYTANTV LALLQEVAQF QSAKIDWNAL VKTTTTGISN  60
AREYQLLWRH LAYRHALFEK LEDGAQPLDD DSDLEYELQA FPDVSTEAST EAAACVKVLI  120
ASGLPSDSIH PNSTTVEAPL TINIPNGQAV RSTSENLQPA TMRGMNITVP VSVQKQPLPA  180
VTSTDRLDAN GSASGTIPAR RKRKPWLESE DMKLIAAVQK YGEGNWANIL RSEFKWDRTA  240
SQLSQRWAII RKRRLGNWNL GGNTSGVQLT EAQRAALHAM NLALDPPVKN TFANNSVRPL  300
ANSQVAVNKP LKPDLSSNPV RAAAVAAGAR VATQSDAASL LKAARAKNVV HIMPASSSSI  360
TSLPGGASSH SDALPNVHLN DQAAASFSTH PVLASKKASS PTTQPTPISD AAMNMSSEQA  420
NAELSSKQDT ETTGEIKFLS EDVTKVQVQE HQGFVSGNDP GELVQEEKAA LPKQAVEFKT  480
QVAVAQCSNA SLEVNMGESD MVDVHGNQAE GSQNSNGEKV MSLSSVGKNE NQSAVQENGD  540
NKTTSIKQVD IQSVATDKCS EKFEAVSKAE PCNVMTEGEG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09710.1	3e-89	MYB_related family protein