PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021660419.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family GRAS
Protein Properties Length: 501aa    MW: 56673.3 Da    PI: 5.585
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021660419.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS361.11.6e-1101185003374
            GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlt 97 
                     + Lle A+a+++++ +++q+l++ l+elasp+gdp q+la+yf++AL +r+++s++++y++l++ ++++ + +++ +++  f+evsP+ +f+h+ 
  XP_021660419.1 118 DILLETARAIADKNSARVQQLMWMLNELASPYGDPDQKLASYFLQALFSRMTDSGERCYRTLASASDKTCSFESTRKMVLKFQEVSPWTTFGHVS 212
                     679***********************************************************9888886665555555556************** PP

            GRAS  98 aNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg...........skeeleetgerLakfAeelgvpfefnvl 181
                     +N aI+ea+ege+++HiiD++ ++++QWp+Ll+aLa+R++++p+lR+T+v++ +++            ++ ++e+g+r++kfA+ +gvpf+f+++
  XP_021660419.1 213 CNGAIMEAFEGETKLHIIDISNTYCTQWPTLLEALATRTDETPHLRLTTVVATKTSgggrgngslaaAQKVMKEIGSRMEKFARLMGVPFKFRAI 307
                     **************************************************99887789********999************************** PP

            GRAS 182 vak.rledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnse....sFlerflealeyysalfdsl 271
                     ++  +l dl+l eL++k +Eala+n+v +lh++     s++++rd +++ +++l+P+++++ve+ead++ +    +F+++f e+l+++ + f+sl
  XP_021660419.1 308 HHAgDLCDLNLAELDIKDDEALAINCVGSLHSVT----SVADRRDYIISSFRRLQPRIITIVEEEADLDVGvdglDFVRGFQECLRWFRVYFESL 398
                     7777*****************************8....888899*********************8885444555******************** PP

            GRAS 272 eaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdg.yrveeesgslvlgWkdr 365
                     e++++r+s+er ++Er   gr+iv++vac+ ++ +er+et+ +W++r++++GF++v +s+++ +++++llr++k +g  + ++++g ++l+Wkd+
  XP_021660419.1 399 EESFSRTSNERLMLERT-AGRAIVDLVACSPSDCIERRETATRWSARMHACGFSTVLFSDEVCDDVRALLRRYK-EGwSMTQCSDGGIFLCWKDQ 491
                     *****************.********************************************************.662666799*********** PP

            GRAS 366 pLvsvSaWr 374
                     p+v++SaWr
  XP_021660419.1 492 PVVWASAWR 500
                     ********8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 501 aa     Download sequence    
MDTLFRLVSH QQSDQSFNNS TSRTSSSSRS SRQNNHHHYQ QEDEECFNFF MDEEDFSSSS  60
SKHCYPYHHQ QHTTAATPTT TTTNTSTPTT QHALESTDFS FSSTCDLNFE FSGQWASDIL  120
LETARAIADK NSARVQQLMW MLNELASPYG DPDQKLASYF LQALFSRMTD SGERCYRTLA  180
SASDKTCSFE STRKMVLKFQ EVSPWTTFGH VSCNGAIMEA FEGETKLHII DISNTYCTQW  240
PTLLEALATR TDETPHLRLT TVVATKTSGG GRGNGSLAAA QKVMKEIGSR MEKFARLMGV  300
PFKFRAIHHA GDLCDLNLAE LDIKDDEALA INCVGSLHSV TSVADRRDYI ISSFRRLQPR  360
IITIVEEEAD LDVGVDGLDF VRGFQECLRW FRVYFESLEE SFSRTSNERL MLERTAGRAI  420
VDLVACSPSD CIERRETATR WSARMHACGF STVLFSDEVC DDVRALLRRY KEGWSMTQCS  480
DGGIFLCWKD QPVVWASAWR P
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37650.10.0GRAS family protein