PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021660501.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

Trihelix

Protein Properties

Length: 442aa MW: 50482.1 Da PI: 5.913

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021660501.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	80.4	2.6e-25	117	213	1	85
trihelix 1 rWtkqevlaLiearremeerlrrgk...........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfd 83 +Wt+++v++Li+a+++++e+ +++ +kk++W+++sk+m erg ++sp+qC++k+++lnkrykk++++ +++ +++++++ +++d XP_021660501.1 117 KWTDKMVRLLITAVSYIGEDAASDCggsmrrkfsvlQKKGKWKSISKVMDERGHRVSPQQCEDKFNDLNKRYKKLNDMLGRGtSCQVVENPALLD 211 7******************999888899999999********************************************5699998888877 PP trihelix 84 ql 85 + XP_021660501.1 212 VI 213 65 PP

Sequence ? help Back to Top
Protein Sequence Length: 442 aa Download sequence
MEGNLSQGSM IPGGTPFGGL DLQGSMRVPV HQQAQHQHAV HHQQLPLHQQ GFHEGFPLTM 60 GAGHNSDQTI SMTDYNKGDE GKNSASDVDE PSYTEDGADG HNDASKGKKG SPWQRVKWTD 120 KMVRLLITAV SYIGEDAASD CGGSMRRKFS VLQKKGKWKS ISKVMDERGH RVSPQQCEDK 180 FNDLNKRYKK LNDMLGRGTS CQVVENPALL DVIDYLTEKE KEDVRKILSS KHLFYEEMCS 240 YHNGNRLHLP HDPALQRSLH LALGSKDDHD NDDVRRQQHD DLDEDDQEVE TDDHDELEEN 300 QPSPGDGRGM YGVLGGSVKR LRQGQGLEDV YFGNSSQDGN KGSYSRLQIP QVDMNQVSSE 360 SIRAACLQKQ WMESCMLQLE EQNVQLQHEM LELEKQRFKW QRFSKKRDNE LEKLRMENER 420 MKLENERMAL ELKRKEMGID FN

Sequence ? help Back to Top

Protein Sequence Length: 442 aa Download sequence

MEGNLSQGSM IPGGTPFGGL DLQGSMRVPV HQQAQHQHAV HHQQLPLHQQ GFHEGFPLTM  60
GAGHNSDQTI SMTDYNKGDE GKNSASDVDE PSYTEDGADG HNDASKGKKG SPWQRVKWTD  120
KMVRLLITAV SYIGEDAASD CGGSMRRKFS VLQKKGKWKS ISKVMDERGH RVSPQQCEDK  180
FNDLNKRYKK LNDMLGRGTS CQVVENPALL DVIDYLTEKE KEDVRKILSS KHLFYEEMCS  240
YHNGNRLHLP HDPALQRSLH LALGSKDDHD NDDVRRQQHD DLDEDDQEVE TDDHDELEEN  300
QPSPGDGRGM YGVLGGSVKR LRQGQGLEDV YFGNSSQDGN KGSYSRLQIP QVDMNQVSSE  360
SIRAACLQKQ WMESCMLQLE EQNVQLQHEM LELEKQRFKW QRFSKKRDNE LEKLRMENER  420
MKLENERMAL ELKRKEMGID FN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G21200.1	1e-175	Trihelix family protein