PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021660810.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

bHLH

Protein Properties

Length: 564aa MW: 61327.1 Da PI: 7.0374

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021660810.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	30.2	8e-10	371	418	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P++ sk Ka +L + ++Y++sLq XP_021660810.1 371 SHSLAERVRREKISERMKLLQDLVPSC----SKVTGKALMLDEIINYVQSLQ 418 8***********************9....566***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 564 aa Download sequence
MEGEFFLNAG IPPPPLDFEP TSASTWHALS SAMDMQANEL NCSAGQSTDC FSTPNWEKST 60 DQGLNFDSAL SSMVSSPAAS NSNISSESFM IRELIGKLGN IGSGTTTNNN SPMLAGSYIT 120 PGNNSTNTSR YGTPLNSPPK LNLPPLDQFP KEILNFPSLG KPMALNSSVA EFTADPGFAE 180 RAARFSCFGT RSFNGRSSQF GLNNAEFAYK CNPLMGNGKL PRVSSSPSFK VIGSQKGNKS 240 SPLQDRYELA NSSQESSVSE QTPNGETALK VSSELNSKKR KAVSKGKAKE SRPASTPPAN 300 SAKDAEIDDN SNTKRTKRNE GNGNEKSAVK AEEDQKGSGD EKQTKNNNSK PPEPPKDYIH 360 VRARRGQATD SHSLAERVRR EKISERMKLL QDLVPSCSKV TGKALMLDEI INYVQSLQRQ 420 VEFLSMKLAS VNTRLDFNMD TLNSKDIFQS THQLPHPIFP LDSSASAIFG HQHQPQQTPA 480 LHSNISSGTM TQCSADALDT GLCQSLNMQL PPLEGFNHSG PQYSLFCEDD LQTIVQMGFG 540 QNLNRESTHN FTGPSQFPQM KTEL

Sequence ? help Back to Top

Protein Sequence Length: 564 aa Download sequence

MEGEFFLNAG IPPPPLDFEP TSASTWHALS SAMDMQANEL NCSAGQSTDC FSTPNWEKST  60
DQGLNFDSAL SSMVSSPAAS NSNISSESFM IRELIGKLGN IGSGTTTNNN SPMLAGSYIT  120
PGNNSTNTSR YGTPLNSPPK LNLPPLDQFP KEILNFPSLG KPMALNSSVA EFTADPGFAE  180
RAARFSCFGT RSFNGRSSQF GLNNAEFAYK CNPLMGNGKL PRVSSSPSFK VIGSQKGNKS  240
SPLQDRYELA NSSQESSVSE QTPNGETALK VSSELNSKKR KAVSKGKAKE SRPASTPPAN  300
SAKDAEIDDN SNTKRTKRNE GNGNEKSAVK AEEDQKGSGD EKQTKNNNSK PPEPPKDYIH  360
VRARRGQATD SHSLAERVRR EKISERMKLL QDLVPSCSKV TGKALMLDEI INYVQSLQRQ  420
VEFLSMKLAS VNTRLDFNMD TLNSKDIFQS THQLPHPIFP LDSSASAIFG HQHQPQQTPA  480
LHSNISSGTM TQCSADALDT GLCQSLNMQL PPLEGFNHSG PQYSLFCEDD LQTIVQMGFG  540
QNLNRESTHN FTGPSQFPQM KTEL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G07340.1	2e-99	bHLH family protein