PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021661024.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

C2H2

Protein Properties

Length: 374aa MW: 42904.6 Da PI: 6.5904

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021661024.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.3	0.00052	79	101	3	23
ET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 3 Cp..dCgksFsrksnLkrHirtH 23 C+ Cgk+F + L++H H XP_021661024.1 79 CSfeGCGKTFIDAGALRKHSHIH 101 77779**************7766 PP
2	zf-C2H2	15.5	4.9e-05	106	130	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y C+ Cgk F ++s LkrH H XP_021661024.1 106 YICHyeGCGKKFLDSSKLKRHFLIH 130 89*******************8877 PP
3	zf-C2H2	21.7	5.3e-07	136	160	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 ++Cp Cgk Fs nL++H++tH XP_021661024.1 136 FVCPheGCGKAFSLDFNLRSHMKTH 160 89**********************9 PP
4	zf-C2H2	14.7	9e-05	166	190	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 + Cp Cgk++ + + Lk+Hi+ H XP_021661024.1 166 HICPysECGKRYAHEYKLKNHISAH 190 68********************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 374 aa Download sequence
METQFTHNLY ERRPFVKSKA PAVKWFKEWV PQDVVATGGK CSLFKWVNEN QLKALKEKAK 60 ESPAPEPEPE PTTEVLFLCS FEGCGKTFID AGALRKHSHI HGERQYICHY EGCGKKFLDS 120 SKLKRHFLIH TGERDFVCPH EGCGKAFSLD FNLRSHMKTH SQENYHICPY SECGKRYAHE 180 YKLKNHISAH HEKHATADAV KYTTPPEKIT KVSKPSAVAY GSASSDRPYA CPYEGCIKAY 240 IHEYKLKLHL RKEHPGHMSD ENAENASPNA DNEMDEASDQ DAYAEKRVNG KSRKQSRPKP 300 NLKMPPSKIT QRKGASPSRA SLNVVKKSWQ AKEETYEEED SEETEEEDRD NAEDGWRYGE 360 NNEDDDDEET EYED

Sequence ? help Back to Top

Protein Sequence Length: 374 aa Download sequence

METQFTHNLY ERRPFVKSKA PAVKWFKEWV PQDVVATGGK CSLFKWVNEN QLKALKEKAK  60
ESPAPEPEPE PTTEVLFLCS FEGCGKTFID AGALRKHSHI HGERQYICHY EGCGKKFLDS  120
SKLKRHFLIH TGERDFVCPH EGCGKAFSLD FNLRSHMKTH SQENYHICPY SECGKRYAHE  180
YKLKNHISAH HEKHATADAV KYTTPPEKIT KVSKPSAVAY GSASSDRPYA CPYEGCIKAY  240
IHEYKLKLHL RKEHPGHMSD ENAENASPNA DNEMDEASDQ DAYAEKRVNG KSRKQSRPKP  300
NLKMPPSKIT QRKGASPSRA SLNVVKKSWQ AKEETYEEED SEETEEEDRD NAEDGWRYGE  360
NNEDDDDEET EYED

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G06634.1	1e-151	C2H2 family protein