PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021661230.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

LBD

Protein Properties

Length: 216aa MW: 24181 Da PI: 8.7022

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021661230.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	59.8	7.8e-19	23	63	1	41
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasn 41 aCa+Ck++r+kC++dC+lapyfpa+++++f++vhk+FG+sn XP_021661230.1 23 ACASCKHQRKKCTEDCMLAPYFPADRSREFQAVHKVFGVSN 63 7**************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 216 aa Download sequence
MQRNNNSSSN SDTSGITVMH LGACASCKHQ RKKCTEDCML APYFPADRSR EFQAVHKVFG 60 VSNNDPILGP LGEYRKIQEE LKSYKNQNQL VQQQQRLPGA GGGMMCKATP GMAAWNNGIN 120 NSNNTNMVNF SHDNGSIIYS SYPFKYVQGP EKVKKQEKDA GSRLLPLPAP SPPQQQRDHS 180 ITSGFTHHQQ YHLPANWQFG YVNGKTMDST LWEEES

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G06280.1	4e-25	LBD family protein