PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021661464.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 327aa MW: 36792.2 Da PI: 6.9433

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021661464.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.3	1.3e-16	35	82	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT eEd llv+++++ G g+W++ a++ g++Rt+k+c++rw++yl XP_021661464.1 35 RGPWTLEEDNLLVHYIARDGEGRWNLLAKRAGLRRTGKSCRLRWLNYL 82 89********************************************97 PP
2	Myb_DNA-binding	51.7	2e-16	89	131	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g+ T++E++l++d++ ++G++ W++Ia++++ gRt++++k++w++ XP_021661464.1 89 GNLTPQEQLLILDLHSKWGNR-WSKIAQHLP-GRTDNEIKNYWRT 131 678****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 327 aa Download sequence
MTVVAMSSSL SSSSLSKKKS LSSSSDDDHS DQLRRGPWTL EEDNLLVHYI ARDGEGRWNL 60 LAKRAGLRRT GKSCRLRWLN YLKPDVKHGN LTPQEQLLIL DLHSKWGNRW SKIAQHLPGR 120 TDNEIKNYWR TRVQKQARHL KVDANSAAFQ DIIRCFWIPR LLQKIEGSKT LSLSSSSSRS 180 SSMLSQNPTV SDQPVNYAAP DLPLPPPPPQ QLPQEVSGYH QEHLDHNSDS EHTSNSCISS 240 TESMNFSQIS QLSEYPNSPF HGMGTFQKDC YYVDIGCNNM ETMALATLSV PAGEFQNPLC 300 DPHVAESNWV GCDFGGNIWS MDEFMAI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68320.1	9e-77	MYB family protein