PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021661872.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

WOX

Protein Properties

Length: 351aa MW: 40220.9 Da PI: 8.0665

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021661872.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	70.2	2.5e-22	90	149	3	57
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+++t+eql +Lee++++ +r+p+ae+++++A++l +++ ++V++WFqN++a+e++ XP_021661872.1 90 SRWNPTPEQLLALEEMYRRgTRTPTAEQIQQIAAQLrrfgKIEGKNVFYWFQNHKARERQ 149 7***************99************************************97 PP
2	Wus_type_Homeobox	113.3	1.2e-36	89	151	3	65
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ++RW+PtpeQ+ Lee+y++G+rtP++e+iq+i+a+L+++Gkie+kNVfyWFQN+kaRerqk+ XP_021661872.1 89 SSRWNPTPEQLLALEEMYRRGTRTPTAEQIQQIAAQLRRFGKIEGKNVFYWFQNHKARERQKR 151 79***********************************************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 351 aa Download sequence
MMNRGDKNVL NMNDSVYFAE FLPTISPKPK SRSTSHITTT LPYSSCTHST TSTRLGLDGH 60 LLGSGNNINA SEQNRREIFM NEQPLMGMSS RWNPTPEQLL ALEEMYRRGT RTPTAEQIQQ 120 IAAQLRRFGK IEGKNVFYWF QNHKARERQK RRREVETSCK VRKHDTAGNL DMKESAGGLR 180 RTVYEVEQKK TLVPPSSCSE HLEEPVSMLR AVTTESTTTC GWSQFERELH QHKSCSVEKN 240 TTWQTVEYPS SYPSQLINNM TTRSSSSRFL NSQKQNSWFK PSRRSENETN LDDNDEDDKI 300 EEVETLELFP LCSSEDCNGV NGSKNDTKVP ITAINTKLSP NQFFEFLPLK N

Sequence ? help Back to Top

Protein Sequence Length: 351 aa Download sequence

MMNRGDKNVL NMNDSVYFAE FLPTISPKPK SRSTSHITTT LPYSSCTHST TSTRLGLDGH  60
LLGSGNNINA SEQNRREIFM NEQPLMGMSS RWNPTPEQLL ALEEMYRRGT RTPTAEQIQQ  120
IAAQLRRFGK IEGKNVFYWF QNHKARERQK RRREVETSCK VRKHDTAGNL DMKESAGGLR  180
RTVYEVEQKK TLVPPSSCSE HLEEPVSMLR AVTTESTTTC GWSQFERELH QHKSCSVEKN  240
TTWQTVEYPS SYPSQLINNM TTRSSSSRFL NSQKQNSWFK PSRRSENETN LDDNDEDDKI  300
EEVETLELFP LCSSEDCNGV NGSKNDTKVP ITAINTKLSP NQFFEFLPLK N

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18010.1	5e-45	WOX family protein