PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021662085.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family TCP
Protein Properties Length: 482aa    MW: 52070.9 Da    PI: 8.3054
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021662085.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP117.61.5e-36872422134
             TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt...............ssssaseceaesssss 81 
                      g+kdrhsk+ T++g+RdRRvRls+++a++f+dLqd+LG+d++sk++eWL+++a  ai el+++                             s 
  XP_021662085.1  87 SGGKDRHSKVWTSKGLRDRRVRLSVTTAIQFYDLQDRLGYDQPSKAVEWLIKAAADAINELPSLngsfpdtpkqlsdqkR------------TSD 169
                     689*************************************************************7755544333322220............111 PP

             TCP  82 asnsssg...................kaaksaakskksqksaasalnlak....esrakarararertrekmrikn 134
                     + +   +                    + +++a+s+ s++s+ s l+l++      r kar+rarer ++++ ++n
  XP_021662085.1 170 GTE---QgldsadveledpnfnqnqhLSLSKSACSSTSDTSKGSGLSLSRsdirVNRVKARERARERAAKEKEKEN 242
                     111...1122333334444444444455666667777777777777777753446669********7766665554 PP
Sequence ? help Back to Top
Protein Sequence    Length: 482 aa     Download sequence    
MEVEESQTQP SKFSRVGNGR SDTSKIGQKG SGDHQYPDDE EDGDLKRPNL GTGSIGGGSR  60
SGGDAGSANR LRGWQHSSRI IRVSRASGGK DRHSKVWTSK GLRDRRVRLS VTTAIQFYDL  120
QDRLGYDQPS KAVEWLIKAA ADAINELPSL NGSFPDTPKQ LSDQKRTSDG TEQGLDSADV  180
ELEDPNFNQN QHLSLSKSAC SSTSDTSKGS GLSLSRSDIR VNRVKARERA RERAAKEKEK  240
ENESRLAHHQ NMNPISQGST FTELLTAGIS SVSNNNNNNN GNNNGATTSP VSEANLFHKE  300
AAPARQWPLT PLDYFSTGLL GPSSSRTTHH LSGFSGQIQL GNSIPQAMTM SIPQFNFSGE  360
NSQEQLQHFP FVSDHLIPVA TTQPGPGGDY NLNFTISSGL AGFNRGTLQS NSSSPSLLPH  420
LQRFSSSPVD GSTNVPFFIG AAGAPPPPME NHHHHHQFPP PGLQLCYGDG SRHSDQKGKG  480
KN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18390.13e-42TCP family protein