PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021662197.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

C2H2

Protein Properties

Length: 436aa MW: 49557.2 Da PI: 7.0821

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021662197.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.3	1.3e-05	183	206	1	23
EEETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23 y C+ Cg+ ++++++Lk+H r H XP_021662197.1 183 YICGVCGRKCKNNMDLKKHFRQlH 206 89*****************99877 PP

Sequence ? help Back to Top
Protein Sequence Length: 436 aa Download sequence
MPLSLCCRQI SPRPESMVPL SLCNPIDTSS SLLKPPLLHF SQSIANTINL KIRFTFTSKP 60 LIVSPLHSTQ CLIAARAADH AVSSAATSEI DMVRNRQGVY TSKQNKVVVL WDLDNKPPRG 120 APYPAAMALK QLAQRFGDII EMSAYANRHA FVHLPHWVVQ ERRERKQLDI LERKGLVAPS 180 EPYICGVCGR KCKNNMDLKK HFRQLHERER QKKLSRMKSL KGKKRQRFKE RFISGNYKYN 240 EEARRLLTPK VGYGLAAELR KAGVYVKTVE DKPQAADWAL KRQIEHSMSR GVDWLFLISD 300 DSDFCDILRR AREANLGTVV VGDRDRALGR HADFWVPWLG VENGEVTEND LVPKSRNISE 360 DREENDGFFS VTHFEGNVAG VEGDVDNVLN ELAGARSDWS GVRISVFSEG EEEEDQDYFL 420 WDSEDEDIEG EDGDFL

Sequence ? help Back to Top

Protein Sequence Length: 436 aa Download sequence

MPLSLCCRQI SPRPESMVPL SLCNPIDTSS SLLKPPLLHF SQSIANTINL KIRFTFTSKP  60
LIVSPLHSTQ CLIAARAADH AVSSAATSEI DMVRNRQGVY TSKQNKVVVL WDLDNKPPRG  120
APYPAAMALK QLAQRFGDII EMSAYANRHA FVHLPHWVVQ ERRERKQLDI LERKGLVAPS  180
EPYICGVCGR KCKNNMDLKK HFRQLHERER QKKLSRMKSL KGKKRQRFKE RFISGNYKYN  240
EEARRLLTPK VGYGLAAELR KAGVYVKTVE DKPQAADWAL KRQIEHSMSR GVDWLFLISD  300
DSDFCDILRR AREANLGTVV VGDRDRALGR HADFWVPWLG VENGEVTEND LVPKSRNISE  360
DREENDGFFS VTHFEGNVAG VEGDVDNVLN ELAGARSDWS GVRISVFSEG EEEEDQDYFL  420
WDSEDEDIEG EDGDFL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G52010.1	1e-161	C2H2 family protein