PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021662436.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

Nin-like

Protein Properties

Length: 916aa MW: 103015 Da PI: 6.0601

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021662436.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	89.8	2.1e-28	606	656	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek+isl+ l++yF++++kdAAk++gvc+T+LKriCRq+GI+RWP+Rkik++ XP_021662436.1 606 EKTISLQILRQYFAGSLKDAAKSIGVCPTTLKRICRQHGINRWPSRKIKKV 656 799**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 916 aa Download sequence
MDHGACALNS TLWTFSSATM DLDSMDKPLS QGYGLETTDR VNFLEPEPFI SSVLYDSSLY 60 SPFSADSHHQ IYQKEMMNLV ENSPPVYPGI KGVETAISLV QSESFALEDG NSGSKWLIDP 120 SYSVKHRLML AIQYLKEYVE DSDVLIQIWV PTKIGGQNVL TTIGQPYCLN QNYKSLASYR 180 NVSKTFHLTA EESSKESAGL PGRVFLGKLP EWTPDVRFFR SNECPRKSYA KMYNISGCLA 240 LPVFEEGNGI CLAVVEIVTT TQKISYHLEL EIVGKALKAV DLKSSQDFFP HGVQACNEFH 300 QISIPEISEI LQFVCKTRRL PLAVTWALSD RRGENEHWQF SEKYDHCIAT VDSACYVADG 360 DLLGFQEACS EQYLFLDQGI VGKAFTTSKQ WFATDITSFS KANYPLSHHA RMFNLHAALA 420 IPLQNRYTGL VELVLELFLP RDCKDIEEQK HLWDTLSIII SQACKSFHVV LEKELDDEVN 480 EQVIVASDGS HNKEGFQKLV SSPSKVRSQE ESLWTPHEGD TQKKDKFAFI SWECPKEEPE 540 EEFKFITHWE NDGMDLYQEH VFSELGQVEQ SSMLKHGVEG GENFSIGQCC SLSSKRPGEK 600 RQTKIEKTIS LQILRQYFAG SLKDAAKSIG VCPTTLKRIC RQHGINRWPS RKIKKVNHSL 660 RKLQLVVNSI HGAEGLIQID SFYKSFPELN SPNFSGKGPF SLPNISENSN KVNPQPESGL 720 LSPKDSDSNS QSSSCSQNSG STIYCSNEEK NLATTNGLNT GSSLAIEDPV LALKTYSKAE 780 LHSLNQEEPK IPTSSQSPKT LHGNQRSHTL PHLPKSTDHG LRDGVIFRVK ATFGEENVRF 840 SFLPNWGFRD LQQEIAKRFR IDNFSRIDLK YLDIDHEPVL LTCDADLEEC MDLLRFSQCN 900 TIKISLHQAS KPNLGS

Sequence ? help Back to Top

Protein Sequence Length: 916 aa Download sequence

MDHGACALNS TLWTFSSATM DLDSMDKPLS QGYGLETTDR VNFLEPEPFI SSVLYDSSLY  60
SPFSADSHHQ IYQKEMMNLV ENSPPVYPGI KGVETAISLV QSESFALEDG NSGSKWLIDP  120
SYSVKHRLML AIQYLKEYVE DSDVLIQIWV PTKIGGQNVL TTIGQPYCLN QNYKSLASYR  180
NVSKTFHLTA EESSKESAGL PGRVFLGKLP EWTPDVRFFR SNECPRKSYA KMYNISGCLA  240
LPVFEEGNGI CLAVVEIVTT TQKISYHLEL EIVGKALKAV DLKSSQDFFP HGVQACNEFH  300
QISIPEISEI LQFVCKTRRL PLAVTWALSD RRGENEHWQF SEKYDHCIAT VDSACYVADG  360
DLLGFQEACS EQYLFLDQGI VGKAFTTSKQ WFATDITSFS KANYPLSHHA RMFNLHAALA  420
IPLQNRYTGL VELVLELFLP RDCKDIEEQK HLWDTLSIII SQACKSFHVV LEKELDDEVN  480
EQVIVASDGS HNKEGFQKLV SSPSKVRSQE ESLWTPHEGD TQKKDKFAFI SWECPKEEPE  540
EEFKFITHWE NDGMDLYQEH VFSELGQVEQ SSMLKHGVEG GENFSIGQCC SLSSKRPGEK  600
RQTKIEKTIS LQILRQYFAG SLKDAAKSIG VCPTTLKRIC RQHGINRWPS RKIKKVNHSL  660
RKLQLVVNSI HGAEGLIQID SFYKSFPELN SPNFSGKGPF SLPNISENSN KVNPQPESGL  720
LSPKDSDSNS QSSSCSQNSG STIYCSNEEK NLATTNGLNT GSSLAIEDPV LALKTYSKAE  780
LHSLNQEEPK IPTSSQSPKT LHGNQRSHTL PHLPKSTDHG LRDGVIFRVK ATFGEENVRF  840
SFLPNWGFRD LQQEIAKRFR IDNFSRIDLK YLDIDHEPVL LTCDADLEEC MDLLRFSQCN  900
TIKISLHQAS KPNLGS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35270.1	0.0	Nin-like family protein