PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021662439.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

Nin-like

Protein Properties

Length: 900aa MW: 101258 Da PI: 6.0761

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021662439.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	89.9	2.1e-28	590	640	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek+isl+ l++yF++++kdAAk++gvc+T+LKriCRq+GI+RWP+Rkik++ XP_021662439.1 590 EKTISLQILRQYFAGSLKDAAKSIGVCPTTLKRICRQHGINRWPSRKIKKV 640 799**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 900 aa Download sequence
MDHGACALNS TLWTFSSATM DLDSMDKPLS QGYGLETTDR VNFLEPEPFI SSVLYDSSLY 60 SPFSADSHHQ IYQKEMMNLV ENSPPVYPGI KGVETAISLV QSESFALEDG NSGSKWLIDP 120 SYSVKHRLML AIQYLKEYVE DSDVLIQIWV PTKIGGQNVL TTIGQPYCLN QNYKSLASYR 180 NVSKTFHLTA EESSKESAGL PGRVFLGKLP EWTPDVRFFR SNECPRKSYA KMYNISGCLA 240 LPVFEEGNGI CLAVVEIVTT TQKISYHLEL EIVGKALKAC NEFHQISIPE ISEILQFVCK 300 TRRLPLAVTW ALSDRRGENE HWQFSEKYDH CIATVDSACY VADGDLLGFQ EACSEQYLFL 360 DQGIVGKAFT TSKQWFATDI TSFSKANYPL SHHARMFNLH AALAIPLQNR YTGLVELVLE 420 LFLPRDCKDI EEQKHLWDTL SIIISQACKS FHVVLEKELD DEVNEQVIVA SDGSHNKEGF 480 QKLVSSPSKV RSQEESLWTP HEGDTQKKDK FAFISWECPK EEPEEEFKFI THWENDGMDL 540 YQEHVFSELG QVEQSSMLKH GVEGGENFSI GQCCSLSSKR PGEKRQTKIE KTISLQILRQ 600 YFAGSLKDAA KSIGVCPTTL KRICRQHGIN RWPSRKIKKV NHSLRKLQLV VNSIHGAEGL 660 IQIDSFYKSF PELNSPNFSG KGPFSLPNIS ENSNKVNPQP ESGLLSPKDS DSNSQSSSCS 720 QNSGSTIYCS NEEKNLATTN GLNTGSSLAI EDPVLALKTY SKAELHSLNQ EEPKIPTSSQ 780 SPKTLHGNQR SHTLPHLPKS TDHGLRDGVI FRVKATFGEE NVRFSFLPNW GFRDLQQEIA 840 KRFRIDNFSR IDLKYLDIDH EPVLLTCDAD LEECMDLLRF SQCNTIKISL HQASKPNLGS

Sequence ? help Back to Top

Protein Sequence Length: 900 aa Download sequence

MDHGACALNS TLWTFSSATM DLDSMDKPLS QGYGLETTDR VNFLEPEPFI SSVLYDSSLY  60
SPFSADSHHQ IYQKEMMNLV ENSPPVYPGI KGVETAISLV QSESFALEDG NSGSKWLIDP  120
SYSVKHRLML AIQYLKEYVE DSDVLIQIWV PTKIGGQNVL TTIGQPYCLN QNYKSLASYR  180
NVSKTFHLTA EESSKESAGL PGRVFLGKLP EWTPDVRFFR SNECPRKSYA KMYNISGCLA  240
LPVFEEGNGI CLAVVEIVTT TQKISYHLEL EIVGKALKAC NEFHQISIPE ISEILQFVCK  300
TRRLPLAVTW ALSDRRGENE HWQFSEKYDH CIATVDSACY VADGDLLGFQ EACSEQYLFL  360
DQGIVGKAFT TSKQWFATDI TSFSKANYPL SHHARMFNLH AALAIPLQNR YTGLVELVLE  420
LFLPRDCKDI EEQKHLWDTL SIIISQACKS FHVVLEKELD DEVNEQVIVA SDGSHNKEGF  480
QKLVSSPSKV RSQEESLWTP HEGDTQKKDK FAFISWECPK EEPEEEFKFI THWENDGMDL  540
YQEHVFSELG QVEQSSMLKH GVEGGENFSI GQCCSLSSKR PGEKRQTKIE KTISLQILRQ  600
YFAGSLKDAA KSIGVCPTTL KRICRQHGIN RWPSRKIKKV NHSLRKLQLV VNSIHGAEGL  660
IQIDSFYKSF PELNSPNFSG KGPFSLPNIS ENSNKVNPQP ESGLLSPKDS DSNSQSSSCS  720
QNSGSTIYCS NEEKNLATTN GLNTGSSLAI EDPVLALKTY SKAELHSLNQ EEPKIPTSSQ  780
SPKTLHGNQR SHTLPHLPKS TDHGLRDGVI FRVKATFGEE NVRFSFLPNW GFRDLQQEIA  840
KRFRIDNFSR IDLKYLDIDH EPVLLTCDAD LEECMDLLRF SQCNTIKISL HQASKPNLGS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35270.1	0.0	Nin-like family protein