PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021662462.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

FAR1

Protein Properties

Length: 691aa MW: 80180.3 Da PI: 6.3758

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021662462.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	69.5	7.8e-22	68	159	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHela 90 ++Y ++A++ GFs+rk++s+ s + g i+kr+fvC+++g++ +kk t +++r r++ r+gC+ak+ ++ke ++w v ++++ HnHel XP_021662462.1 68 DYYGNFARRNGFSIRKERSRLSPQLG-IYKRDFVCYRSGFAPARKKPTGEHHRDRKSVRCGCDAKMYLSKEVvegVSQWFVVQFSNVHNHELL 159 59******************8888.***************************************99877789***********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 691 aa Download sequence
MSSIPSKNIW MRRQQCPCGD WKCYITYEGD SEESSIASQL VKNDTVQSEA MVAPYVGMVF 60 KSDDDAFDYY GNFARRNGFS IRKERSRLSP QLGIYKRDFV CYRSGFAPAR KKPTGEHHRD 120 RKSVRCGCDA KMYLSKEVVE GVSQWFVVQF SNVHNHELLE DDQVRLLPAY RKIHEADQER 180 ILLLSKAGFP IHRIVKVLEL EKGIQGGQLP FLERDVRNFV QNRKKIVQEN DALLTEKREN 240 DTMELLEACK AMKEVDEDFI YDYTVDENDK IENIAWSYGD SVRAYTLFGD VVYFDTSYRS 300 ITYGMLFGAW LGIENNGKTI FFGCVLLQEE TPRSFAWALQ AFIRLMKGKC PQTILTSLDM 360 GLKDAISSEL PSTKHVISMW NILPKVYSWF SLAFGTRFAE FKSKFDELYR IESTEGFELQ 420 WSQMVSIFGL GSDKHIALLN SFRASWALSY VRGYFLARMA TSSYSKSVDA FLKGVCNAQT 480 CLRSFFEQVG ISANFLNQAR QEMQYMLMKT CIPIEEHARS IFTPFAFNAL QHELMLAMQY 540 ALSEMADGSY LVHHFKKMDG EHFVIWIPED EQIHCSCKEF ESSGILCRHA LRVFIQKNYF 600 HLPDKYYLRR WRQESSLVFY DDHYAQSNNG EWFQEYQSLT ETLFTESSIT KERSDFIRRE 660 LPKELTRLLS EVRDMPESEG VAMDLALSPT G

Sequence ? help Back to Top

Protein Sequence Length: 691 aa Download sequence

MSSIPSKNIW MRRQQCPCGD WKCYITYEGD SEESSIASQL VKNDTVQSEA MVAPYVGMVF  60
KSDDDAFDYY GNFARRNGFS IRKERSRLSP QLGIYKRDFV CYRSGFAPAR KKPTGEHHRD  120
RKSVRCGCDA KMYLSKEVVE GVSQWFVVQF SNVHNHELLE DDQVRLLPAY RKIHEADQER  180
ILLLSKAGFP IHRIVKVLEL EKGIQGGQLP FLERDVRNFV QNRKKIVQEN DALLTEKREN  240
DTMELLEACK AMKEVDEDFI YDYTVDENDK IENIAWSYGD SVRAYTLFGD VVYFDTSYRS  300
ITYGMLFGAW LGIENNGKTI FFGCVLLQEE TPRSFAWALQ AFIRLMKGKC PQTILTSLDM  360
GLKDAISSEL PSTKHVISMW NILPKVYSWF SLAFGTRFAE FKSKFDELYR IESTEGFELQ  420
WSQMVSIFGL GSDKHIALLN SFRASWALSY VRGYFLARMA TSSYSKSVDA FLKGVCNAQT  480
CLRSFFEQVG ISANFLNQAR QEMQYMLMKT CIPIEEHARS IFTPFAFNAL QHELMLAMQY  540
ALSEMADGSY LVHHFKKMDG EHFVIWIPED EQIHCSCKEF ESSGILCRHA LRVFIQKNYF  600
HLPDKYYLRR WRQESSLVFY DDHYAQSNNG EWFQEYQSLT ETLFTESSIT KERSDFIRRE  660
LPKELTRLLS EVRDMPESEG VAMDLALSPT G

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28530.1	0.0	FAR1 family protein