PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021662492.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family MIKC_MADS
Protein Properties Length: 227aa    MW: 25788.1 Da    PI: 5.7607
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021662492.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF91.25.1e-29959151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    k+i+n + rqvtfskRr g++KKAeELSvLCda+va+i+fsstgkl+ey+s
  XP_021662492.1  9 KKIDNATARQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLFEYCS 59
                    68***********************************************96 PP
2K-box53.21.3e-18931722099
           K-box  20 elakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 
                     ++++L kei +  +++R++ Ge+L+ L+++eLqqLe+ Le +l+++ +kK e ++++i+elq k  +l een++Lr+++ 
  XP_021662492.1  93 NHSRLSKEIAEKSHQLRQMRGEELQGLNIEELQQLEKSLEAGLSRVIEKKGEKIIKEIRELQTKGMQLMEENERLRQQVV 172
                     6789999999999****************************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 227 aa     Download sequence    
MAREKIQIKK IDNATARQVT FSKRRRGLFK KAEELSVLCD ADVALIVFSS TGKLFEYCSS  60
SMKEILEKHD LHSKNLEKLE QPSLELQLVE DSNHSRLSKE IAEKSHQLRQ MRGEELQGLN  120
IEELQQLEKS LEAGLSRVIE KKGEKIIKEI RELQTKGMQL MEENERLRQQ VVEISNGRKQ  180
AAADSENLVY EEGQSSESVT NVCNSNGPPH DYESSDTSLK LGLPYNG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22540.11e-118MIKC_MADS family protein