PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021662672.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family MIKC_MADS
Protein Properties Length: 241aa    MW: 27743.5 Da    PI: 10.0498
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021662672.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF99.31.5e-312473150
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
                    krien++nrqvtf+kRrng+lKKA+ELSvLCdaeva+i+fss+g+lyey+
  XP_021662672.1 24 KRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYA 73
                    79***********************************************8 PP
2K-box116.72.1e-38921884100
           K-box   4 ssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 
                     s++ s++ea+a+++qqe+akL+ +i+nLq+++Rh+lGe+L+ L++keL++Le +Lek++++iRskKnell+++ie++qk+e +l+++n+ Lr+k+
  XP_021662672.1  92 SNTGSVSEANAQYYQQEAAKLRGQISNLQKSNRHMLGESLGALTVKELKSLEIRLEKGISRIRSKKNELLFAEIEYMQKREIDLHNNNQILRAKI 186
                     444459****************************************************************************************9 PP

           K-box  99 ee 100
                     +e
  XP_021662672.1 187 AE 188
                     86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    
MAYQSESRET SPQRKMGRGK IEIKRIENTT NRQVTFCKRR NGLLKKAYEL SVLCDAEVAL  60
IVFSSRGRLY EYANNSVKST IERYKKACAD SSNTGSVSEA NAQYYQQEAA KLRGQISNLQ  120
KSNRHMLGES LGALTVKELK SLEIRLEKGI SRIRSKKNEL LFAEIEYMQK REIDLHNNNQ  180
ILRAKIAENE RKQQNMNLMP GGGSYEIMQS QPFDNRNYFQ VNALQPANHY PHQDQMSLQL  240
V
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18960.11e-121MIKC_MADS family protein