PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021662720.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

AP2

Protein Properties

Length: 438aa MW: 48173.3 Da PI: 6.8375

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021662720.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	45.1	2.4e-14	158	218	1	56
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkklege 56 s y+GV++++++gr++A+++d + g ++ ++++lg ++ +e+Aa+a++ a++k++g+ XP_021662720.1 158 SIYRGVTRHRWTGRYEAHLWDnSCRrEGqaRKgRQVYLGGYDREEKAARAYDLAALKYWGH 218 57*****************666664478446***********************997 PP
2	AP2	50.5	5e-16	260	311	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++grW A+I + +k +lg+f t+eeAa+a++ a+ k++g XP_021662720.1 260 SIYRGVTRHHQQGRWQARIGRVAG---NKDLYLGTFATEEEAAEAYDIAAIKFRG 311 57**************988532...5**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 438 aa Download sequence
MAEASILTSF IDPEAHHPQA PKLEDFLGDS SSIVRYSDNS QTETQDSSLT HIYDHGSAAY 60 FNDQQDLKAI AGFQAFSTNS GSEVDDSASM ARTQIVGGEF VGHSIESSGN ELGFSNCTGG 120 NNALSLGISN QSSAEKAIVP AESDCPKKIA ETFGQRTSIY RGVTRHRWTG RYEAHLWDNS 180 CRREGQARKG RQVYLGGYDR EEKAARAYDL AALKYWGHTA TTNFPVANYT KELEEMKYVS 240 KQEFIASLRR KSSGFSRGAS IYRGVTRHHQ QGRWQARIGR VAGNKDLYLG TFATEEEAAE 300 AYDIAAIKFR GMNAVTNFEM SRYDVAAIMK SALPIGGAAK RLKLSLEVEQ KPTLNHEQQP 360 RGGSNNINFA SMPLDSAIPC GIPFENTAAL YHHSLIHHIQ SANNFGGTDS SGSTSSMATP 420 MTLLPQTTDF FMWPHQSY

Sequence ? help Back to Top

Protein Sequence Length: 438 aa Download sequence

MAEASILTSF IDPEAHHPQA PKLEDFLGDS SSIVRYSDNS QTETQDSSLT HIYDHGSAAY  60
FNDQQDLKAI AGFQAFSTNS GSEVDDSASM ARTQIVGGEF VGHSIESSGN ELGFSNCTGG  120
NNALSLGISN QSSAEKAIVP AESDCPKKIA ETFGQRTSIY RGVTRHRWTG RYEAHLWDNS  180
CRREGQARKG RQVYLGGYDR EEKAARAYDL AALKYWGHTA TTNFPVANYT KELEEMKYVS  240
KQEFIASLRR KSSGFSRGAS IYRGVTRHHQ QGRWQARIGR VAGNKDLYLG TFATEEEAAE  300
AYDIAAIKFR GMNAVTNFEM SRYDVAAIMK SALPIGGAAK RLKLSLEVEQ KPTLNHEQQP  360
RGGSNNINFA SMPLDSAIPC GIPFENTAAL YHHSLIHHIQ SANNFGGTDS SGSTSSMATP  420
MTLLPQTTDF FMWPHQSY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G10510.1	0.0	AP2 family protein