PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021662774.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

HD-ZIP

Protein Properties

Length: 304aa MW: 34370.3 Da PI: 4.3846

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021662774.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	59.2	6.7e-19	81	135	3	57
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 k++++t+ q++ Le+ F +++++ e++ +LAk+lgL+ rqV +WFqNrRa+ k+ XP_021662774.1 81 KKRRLTAGQVQFLERNFDVENKLDPERKIQLAKELGLQPRQVAIWFQNRRARFKN 135 56689***********************************************995 PP
2	HD-ZIP_I/II	125.7	2e-40	81	171	2	92
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 kkrrl++ qv++LE++F+ e+kL+perK +la+eLglqprqva+WFqnrRAR+k+kqlEkdy++Lk++yd+lk + ++L ke+e+L++el XP_021662774.1 81 KKRRLTAGQVQFLERNFDVENKLDPERKIQLAKELGLQPRQVAIWFQNRRARFKNKQLEKDYDSLKTSYDRLKGDYDNLLKEKENLKNELV 171 9**************************************************************************************9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 304 aa Download sequence
MACDKVSDVS NMTVLLQNDT LPCDSLWIPT SSAIVHGAKS MVNFENGGGE EDTMDTPFFQ 60 GLVKEENGDE DFDVCLNPPG KKRRLTAGQV QFLERNFDVE NKLDPERKIQ LAKELGLQPR 120 QVAIWFQNRR ARFKNKQLEK DYDSLKTSYD RLKGDYDNLL KEKENLKNEL VSLKAKLLAR 180 EKGIGNLEPV EAINSPNVEL QNAVPKTVSE VVSNAPLVIP KQEEATSAKS DVLDSDSPHS 240 FLEPGDSSHV FEPDQSDFSQ DEEDDLSRSF LPTPYFPKLY HDPPANSCSF EFPVEDQPFW 300 SYTY

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	129	137	RRARFKNKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01470.1	3e-38	HD-ZIP family protein