PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021663258.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

bHLH

Protein Properties

Length: 458aa MW: 50538.5 Da PI: 5.9342

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021663258.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	42.2	1.5e-13	253	299	3	54
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h + Er+RR+++ ++++ Lr+l+P++ +K++ a+++ A++YIk+L XP_021663258.1 253 TKHFATERQRRQHLTDKYQALRDLVPNP-----TKNDRASVVGDAINYIKEL 299 78************************.....9**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 458 aa Download sequence
MYEETGCFDP NSMVEGPDGL SQVLKPPPPP VPLMAGSTTN SHNSFEDNIK LSAEELSYHH 60 SNPHQEVDAS AALDIQLQNQ QMAFNTHLMQ DSSNQVLAFA SSSLADASYT PTADLLNLFH 120 LPRCSASSLL PNSSISFTNP THTTPLGLVG DLPMTDTASA SSILYDPLFH LNLPPQPPLF 180 RELFQSLPSH GYSLSGSRDS SLFGGGGDDH VEGSGGGGLY QDGDGEQQFD NGVLEFTWDM 240 ACMGKGRKSG KITKHFATER QRRQHLTDKY QALRDLVPNP TKNDRASVVG DAINYIKELL 300 RNVNELKILV ERKRCARERR KRLKTEEDSI GNNVHESSSI MKPLGDPDQS FNNGSLRSSW 360 LQRKSKDTEV DVRIVDDEVT IKLVQRKKIN CLLIVSKVLD ELQLDLHHVA GGHIGDYYSF 420 LFNTKIYEGS SVYASAIANK LIEVVDRHYA STPSSGCY

Sequence ? help Back to Top

Protein Sequence Length: 458 aa Download sequence

MYEETGCFDP NSMVEGPDGL SQVLKPPPPP VPLMAGSTTN SHNSFEDNIK LSAEELSYHH  60
SNPHQEVDAS AALDIQLQNQ QMAFNTHLMQ DSSNQVLAFA SSSLADASYT PTADLLNLFH  120
LPRCSASSLL PNSSISFTNP THTTPLGLVG DLPMTDTASA SSILYDPLFH LNLPPQPPLF  180
RELFQSLPSH GYSLSGSRDS SLFGGGGDDH VEGSGGGGLY QDGDGEQQFD NGVLEFTWDM  240
ACMGKGRKSG KITKHFATER QRRQHLTDKY QALRDLVPNP TKNDRASVVG DAINYIKELL  300
RNVNELKILV ERKRCARERR KRLKTEEDSI GNNVHESSSI MKPLGDPDQS FNNGSLRSSW  360
LQRKSKDTEV DVRIVDDEVT IKLVQRKKIN CLLIVSKVLD ELQLDLHHVA GGHIGDYYSF  420
LFNTKIYEGS SVYASAIANK LIEVVDRHYA STPSSGCY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31210.1	1e-103	bHLH family protein