PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021663517.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family GRAS
Protein Properties Length: 543aa    MW: 61200.9 Da    PI: 5.5301
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021663517.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS3972e-1211745432374
            GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 
                     ++ Ll+cA+ +s+gd  +a +l+  l++++s +g+pmqRl ay++e+L+ar+  s+s++y+a ++++     ss+ ++++ ++s+++P+ +f++ 
  XP_021663517.1 174 KQMLLACAQSISDGDIPRAARLMHVLEQMVSVSGTPMQRLGAYMLEGLRARVELSGSKIYRASKCEAPL---SSDLMTYMGILSKICPYWRFAYA 265
                     789**********************************************************99999998...9999999**************** PP

            GRAS  97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledl 189
                     +aN  I eave e r+HiiDf+i qG+QW+ L+q+La++p+gpps+ iTgv++p+s   +   l+ +g+rL+ fAe+++vpf+f   +a +  ++
  XP_021663517.1 266 AANVVIREAVEYEPRIHIIDFQIAQGTQWLYLIQSLADQPGGPPSIHITGVDDPQSAhaRGGGLHIVGHRLSCFAESCNVPFQFYD-AAVSGCEV 359
                     *******************************************************99889999**********************9.89999*** PP

            GRAS 190 eleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerik 284
                     +le+L ++pgEa++Vn+ + lh+++desv++ ++rd++L+lvkslsPkvv+++eqe+++n+++Fl rf e+leyy+a+f+s++a+ +r++++ri+
  XP_021663517.1 360 QLEQLGLQPGEAVVVNFPYVLHHMPDESVNTWNHRDRLLRLVKSLSPKVVTLIEQESNTNTKPFLPRFKETLEYYTAMFESIDAGSSRDDKQRIN 454
                     *********************************************************************************************** PP

            GRAS 285 vErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                      E+++++r+iv+v+acega+r+erhe ++kWr+r+ +aGF+++pl+++++  ++ llr+++ + y ++e++g+l+l W + +++++SaWr
  XP_021663517.1 455 AEQHCVARDIVDVIACEGADRVERHELFGKWRSRFIMAGFTQYPLTSTVTGAVRDLLREYD-RNYGLQEKDGALYLWWINTAMTTFSAWR 543
                     *************************************************************.55*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 543 aa     Download sequence    
MQRSQEHHNS AGIHWFNHQS QEIDPYGLSH IQILNNNLFS DVGSQGITVS FQTDKEEYFT  60
LESSAVAGGF VVYDSPAASF SSSRSPFSSQ GSHSCLTDPH HSPDNTYGSP MSGSSSADDD  120
NVLMRQKLRE LEFLLLGSEL DITNDANFCF HQADRLERWD WTQMVEMIPR LDMKQMLLAC  180
AQSISDGDIP RAARLMHVLE QMVSVSGTPM QRLGAYMLEG LRARVELSGS KIYRASKCEA  240
PLSSDLMTYM GILSKICPYW RFAYAAANVV IREAVEYEPR IHIIDFQIAQ GTQWLYLIQS  300
LADQPGGPPS IHITGVDDPQ SAHARGGGLH IVGHRLSCFA ESCNVPFQFY DAAVSGCEVQ  360
LEQLGLQPGE AVVVNFPYVL HHMPDESVNT WNHRDRLLRL VKSLSPKVVT LIEQESNTNT  420
KPFLPRFKET LEYYTAMFES IDAGSSRDDK QRINAEQHCV ARDIVDVIAC EGADRVERHE  480
LFGKWRSRFI MAGFTQYPLT STVTGAVRDL LREYDRNYGL QEKDGALYLW WINTAMTTFS  540
AWR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17230.10.0GRAS family protein