PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021663522.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family GRAS
Protein Properties Length: 525aa    MW: 58851.6 Da    PI: 5.5845
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021663522.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS397.11.8e-1211565252374
            GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 
                     ++ Ll+cA+ +s+gd  +a +l+  l++++s +g+pmqRl ay++e+L+ar+  s+s++y+a ++++     ss+ ++++ ++s+++P+ +f++ 
  XP_021663522.1 156 KQMLLACAQSISDGDIPRAARLMHVLEQMVSVSGTPMQRLGAYMLEGLRARVELSGSKIYRASKCEAPL---SSDLMTYMGILSKICPYWRFAYA 247
                     789**********************************************************99999998...9999999**************** PP

            GRAS  97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledl 189
                     +aN  I eave e r+HiiDf+i qG+QW+ L+q+La++p+gpps+ iTgv++p+s   +   l+ +g+rL+ fAe+++vpf+f   +a +  ++
  XP_021663522.1 248 AANVVIREAVEYEPRIHIIDFQIAQGTQWLYLIQSLADQPGGPPSIHITGVDDPQSAhaRGGGLHIVGHRLSCFAESCNVPFQFYD-AAVSGCEV 341
                     *******************************************************99889999**********************9.89999*** PP

            GRAS 190 eleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerik 284
                     +le+L ++pgEa++Vn+ + lh+++desv++ ++rd++L+lvkslsPkvv+++eqe+++n+++Fl rf e+leyy+a+f+s++a+ +r++++ri+
  XP_021663522.1 342 QLEQLGLQPGEAVVVNFPYVLHHMPDESVNTWNHRDRLLRLVKSLSPKVVTLIEQESNTNTKPFLPRFKETLEYYTAMFESIDAGSSRDDKQRIN 436
                     *********************************************************************************************** PP

            GRAS 285 vErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                      E+++++r+iv+v+acega+r+erhe ++kWr+r+ +aGF+++pl+++++  ++ llr+++ + y ++e++g+l+l W + +++++SaWr
  XP_021663522.1 437 AEQHCVARDIVDVIACEGADRVERHELFGKWRSRFIMAGFTQYPLTSTVTGAVRDLLREYD-RNYGLQEKDGALYLWWINTAMTTFSAWR 525
                     *************************************************************.55*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 525 aa     Download sequence    
MLQTIGICQC IAADNRGNAT KICGRSQGIT VSFQTDKEEY FTLESSAVAG GFVVYDSPAA  60
SFSSSRSPFS SQGSHSCLTD PHHSPDNTYG SPMSGSSSAD DDNVLMRQKL RELEFLLLGS  120
ELDITNDANF CFHQADRLER WDWTQMVEMI PRLDMKQMLL ACAQSISDGD IPRAARLMHV  180
LEQMVSVSGT PMQRLGAYML EGLRARVELS GSKIYRASKC EAPLSSDLMT YMGILSKICP  240
YWRFAYAAAN VVIREAVEYE PRIHIIDFQI AQGTQWLYLI QSLADQPGGP PSIHITGVDD  300
PQSAHARGGG LHIVGHRLSC FAESCNVPFQ FYDAAVSGCE VQLEQLGLQP GEAVVVNFPY  360
VLHHMPDESV NTWNHRDRLL RLVKSLSPKV VTLIEQESNT NTKPFLPRFK ETLEYYTAMF  420
ESIDAGSSRD DKQRINAEQH CVARDIVDVI ACEGADRVER HELFGKWRSR FIMAGFTQYP  480
LTSTVTGAVR DLLREYDRNY GLQEKDGALY LWWINTAMTT FSAWR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17230.10.0GRAS family protein