PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021663576.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

bHLH

Protein Properties

Length: 470aa MW: 53050.8 Da PI: 6.5852

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021663576.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.8	7.9e-13	300	345	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +h e+Er+RR+r+N++f Lr+++P+ K++Ka+ L Av YI +L XP_021663576.1 300 NHVEAERQRRERLNHRFYALRSVVPNV-----SKMDKASLLADAVTYIEEL 345 799*********************6.....5*************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 470 aa Download sequence
MEEITSQCSS SSFMSFCQDS SPPLQQRLQF ILQSRPEWWV YAIFWQASKD STGRLVLSWG 60 DGHFRGTKEF AAKVCNKQNQ HKFGFNLERK LTDKESQILF TDDMDMDRLA DVNVIDYEWF 120 YTVSVTRSFT VEDGILGRTF GSGAFIWLTG NHQLQMYECE RVKEASMHGI QTLTCVSTSC 180 GVVELGSSDS IDKDWSLVQL CKSLFGGDSA CLVSREPSHE SQLQIPNTSF LDIGMFSASQ 240 KETSTEKHNE YDKKKDATGQ GRSSSDSARS DSDGNFVAGS SDRFKKKGRK QLNGKELPLN 300 HVEAERQRRE RLNHRFYALR SVVPNVSKMD KASLLADAVT YIEELKAKVD ELESKLQAVS 360 KKCKSINVTD NQSTDSMIDH TRCSSSYKVK SMELDVKIVG SEAMIRFLSP DVNYPGARLM 420 EVLKEVEFKV HHASMSSIKE MVLQDVVARV PDGLTNEDVV RSAILQRMQN

Sequence ? help Back to Top

Protein Sequence Length: 470 aa Download sequence

MEEITSQCSS SSFMSFCQDS SPPLQQRLQF ILQSRPEWWV YAIFWQASKD STGRLVLSWG  60
DGHFRGTKEF AAKVCNKQNQ HKFGFNLERK LTDKESQILF TDDMDMDRLA DVNVIDYEWF  120
YTVSVTRSFT VEDGILGRTF GSGAFIWLTG NHQLQMYECE RVKEASMHGI QTLTCVSTSC  180
GVVELGSSDS IDKDWSLVQL CKSLFGGDSA CLVSREPSHE SQLQIPNTSF LDIGMFSASQ  240
KETSTEKHNE YDKKKDATGQ GRSSSDSARS DSDGNFVAGS SDRFKKKGRK QLNGKELPLN  300
HVEAERQRRE RLNHRFYALR SVVPNVSKMD KASLLADAVT YIEELKAKVD ELESKLQAVS  360
KKCKSINVTD NQSTDSMIDH TRCSSSYKVK SMELDVKIVG SEAMIRFLSP DVNYPGARLM  420
EVLKEVEFKV HHASMSSIKE MVLQDVVARV PDGLTNEDVV RSAILQRMQN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	306	311	RQRRER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00870.1	5e-66	bHLH family protein