PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021663628.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family M-type_MADS
Protein Properties Length: 325aa    MW: 37092.5 Da    PI: 9.6291
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021663628.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF43.73.6e-141151343
                    --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TT CS
          SRF-TF  3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifsst 43
                    i n+  r +t+ kR++g+ KK +E  +LCd++++vii++++
  XP_021663628.1 11 ITNEKSRMITYQKRKKGLTKKLQEFHILCDVDACVIILGPN 51
                    899***********************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 325 aa     Download sequence    
MGRGKLNMEL ITNEKSRMIT YQKRKKGLTK KLQEFHILCD VDACVIILGP NFNNRPIDVE  60
TWPTDRFDMR RIINRYRSQD KERRKNQDLS SFFVARQKKL DDEIAKMRKA CLKAKFPAWD  120
NRLNLLQSSE LNVLAGVLDS KLEVATSMVL NSKGDHFLMF GSRPEIIEGG YSSDNNYKSS  180
SLASTFANAL QQKKMELEVF KPEPLTFVNA SDQNLPQMLP FNVNPLNSPM LMMANGDNYF  240
SQFVGECSSS KRSPWSPVKA PAYSFDHPAA NVMMMNNNPW AHSGSYCGLS RQSVLPSNVS  300
SHVHIPQFSD IFDINEFEMK NKKPQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18086DKERRKN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G55690.11e-22M-type_MADS family protein