PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021663678.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family Whirly
Protein Properties Length: 229aa    MW: 25305.1 Da    PI: 10.4324
Description Whirly family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021663678.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Whirly195.11e-60531891137
          Whirly   1 svyktkaalkvkavrptfealdsgnlklkraGglllelanataerkydWekkqsfalsatevaelvdlaskesceffhdpaakgsneGkvrkalk 95 
                     sv+k+kaal+v++v ptf++l sgn+k++r+G ++l++++a++erkyd+ek+q+falsatev++l++l++k+s+effhdp++ +sn+G+vrk+l+
  XP_021663678.1  53 SVFKGKAALSVQPVPPTFTKLGSGNVKVERRGIMMLTFMPAMGERKYDYEKRQHFALSATEVGSLISLGPKDSSEFFHDPSMLSSNAGQVRKSLS 147
                     79********************************************************************************************* PP

          Whirly  96 vePlpdGsGlfvnlsvtnslvkgnesfsvPvskaefavlrsl 137
                     ++P +dG G+f++lsv n+++++ne+f vP++ +efavl+++
  XP_021663678.1 148 IKPQADGGGYFMSLSVVNNILRTNERFNVPLTAGEFAVLKTA 189
                     ****************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    
MKLSRLLQHS RNSLGKYVDV RDASRLQALT FQAGISTARQ DFAANERIYA PYSVFKGKAA  60
LSVQPVPPTF TKLGSGNVKV ERRGIMMLTF MPAMGERKYD YEKRQHFALS ATEVGSLISL  120
GPKDSSEFFH DPSMLSSNAG QVRKSLSIKP QADGGGYFMS LSVVNNILRT NERFNVPLTA  180
GEFAVLKTAC SFALPHIMGW DRLTAKLPKE SVGSPSKANR QEPDIEWAK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71260.17e-91Whirly family protein