PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021663901.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

bHLH

Protein Properties

Length: 575aa MW: 62495.4 Da PI: 6.3817

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021663901.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	28	3.9e-09	382	429	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq XP_021663901.1 382 SHSLAERVRREKISERMKLLQDLVPGC----NKVTGKALMLDEIINYVQSLQ 429 8***********************9....677***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 575 aa Download sequence
MEGEFFLNAQ IPPPPLHFEP TSTSAMPIWH SLSSAMEMQA NELNCSTEQS PDCFFTPNWE 60 KSTDQGLHFD SALSSMVSSP AASNSNISGE SFVIRELIGK LGNIGSTNNN SGEISPHSRP 120 MLAASYITPG NNSANTSCYS TPLNSPPKLD LPPLDQFSKE NLKFPSLGKP LGLNSSVAEF 180 TADPGFAERA ARFSCFGSRS FNGRSSQMGL NNADFAYKCN PLMGNGKLPR VSSSPSLKVI 240 GSQKGYKSSP LQDRSELANS SQEESSVSEQ TPNGEAALKS TSELNSKKRK AVSKAKAKES 300 QPGSTPPANC AAKDAETDDN SNTKRSKTNE GNGNEKSAVK AEEEQKGSGG DEKQNQNNNT 360 KPPEPPKDYI HVRARRGQAT DSHSLAERVR REKISERMKL LQDLVPGCNK VTGKALMLDE 420 IINYVQSLQR QVEFLSMKLA SVNTRLDFNM DTLISKDIFQ STNQLPHPIF PLDSSASAIF 480 GHQHQPQQTP ALHSNISSGT MTQCSADALD TGLCQSLNMQ LPPLEGFNHS GPQYSLFCED 540 DLQTIVQMGF GQNLNRESTH NFTGPSQFPQ MKTEL

Sequence ? help Back to Top

Protein Sequence Length: 575 aa Download sequence

MEGEFFLNAQ IPPPPLHFEP TSTSAMPIWH SLSSAMEMQA NELNCSTEQS PDCFFTPNWE  60
KSTDQGLHFD SALSSMVSSP AASNSNISGE SFVIRELIGK LGNIGSTNNN SGEISPHSRP  120
MLAASYITPG NNSANTSCYS TPLNSPPKLD LPPLDQFSKE NLKFPSLGKP LGLNSSVAEF  180
TADPGFAERA ARFSCFGSRS FNGRSSQMGL NNADFAYKCN PLMGNGKLPR VSSSPSLKVI  240
GSQKGYKSSP LQDRSELANS SQEESSVSEQ TPNGEAALKS TSELNSKKRK AVSKAKAKES  300
QPGSTPPANC AAKDAETDDN SNTKRSKTNE GNGNEKSAVK AEEEQKGSGG DEKQNQNNNT  360
KPPEPPKDYI HVRARRGQAT DSHSLAERVR REKISERMKL LQDLVPGCNK VTGKALMLDE  420
IINYVQSLQR QVEFLSMKLA SVNTRLDFNM DTLISKDIFQ STNQLPHPIF PLDSSASAIF  480
GHQHQPQQTP ALHSNISSGT MTQCSADALD TGLCQSLNMQ LPPLEGFNHS GPQYSLFCED  540
DLQTIVQMGF GQNLNRESTH NFTGPSQFPQ MKTEL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G07340.1	1e-117	bHLH family protein