PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021664470.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family M-type_MADS
Protein Properties Length: 121aa    MW: 13863.5 Da    PI: 10.0011
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021664470.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF55.86e-181754138
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEE CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevavi 38
                    k +en   rqvtfsk rng+l KA+ELSvLCdaevav 
  XP_021664470.1 17 KEVENLNSRQVTFSKQRNGLLNKAKELSVLCDAEVAVT 54
                    5689999*****************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 121 aa     Download sequence    
MRCQKRGKQW AEEDRDKEVE NLNSRQVTFS KQRNGLLNKA KELSVLCDAE VAVTVEELQR  60
SSLLSKSTLL KFNPFERRFS VARSTKTASY DEGDSLVACD GTNKRKARKS ESMRNDSRSQ  120
E
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57390.16e-16MIKC_MADS family protein