PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021664490.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

HD-ZIP

Protein Properties

Length: 186aa MW: 21225.2 Da PI: 8.1106

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021664490.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	56.1	6.5e-18	21	73	4	56
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 ++++t++q++ Le+ F n+++ e + +LA++lg++ rqV +W+qN+Ra++k XP_021664490.1 21 KRRLTEDQVRLLERTFTTNKKLEPELKLQLASQLGVPPRQVAIWYQNKRARWK 73 5689************************************************9 PP
2	HD-ZIP_I/II	109.9	1.7e-35	21	111	3	93
HD-ZIP_I/II 3 krrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 krrl+++qv+lLE++F++++kLepe K +la++Lg+ prqva+W+qn+RAR+kt+ lE dy++L+ ++++ ++++rLekev +Lr+el++ XP_021664490.1 21 KRRLTEDQVRLLERTFTTNKKLEPELKLQLASQLGVPPRQVAIWYQNKRARWKTQSLELDYNTLQVKLENALADKRRLEKEVIQLRDELRK 111 9**************************************************************************************9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 186 aa Download sequence
MDFFHTQRQS QQKRPPKHSD KRRLTEDQVR LLERTFTTNK KLEPELKLQL ASQLGVPPRQ 60 VAIWYQNKRA RWKTQSLELD YNTLQVKLEN ALADKRRLEK EVIQLRDELR KAQEMVFALS 120 QGMVPSHPHH LHPALPLPPP LIVSCNSSCD EGGSSSLHEE VNGEVLQLDE LYACLIGSGG 180 GGSAWD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G53980.1	1e-43	HD-ZIP family protein