PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021664638.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 341aa MW: 38414.3 Da PI: 7.3939

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021664638.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	57.6	3e-18	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l+d+++++G g+W+t ++ ++R++k+c++rw +yl XP_021664638.1 14 KGPWTAEEDQKLIDYIQKHGHGRWRTLPKNAELKRCGKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	51.7	1.9e-16	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+++ eE+e +++++ lG++ W++Ia++++ gRt++++k++w+++ XP_021664638.1 67 RGKFSIEEEEAIIQLHSILGNK-WSAIASRLP-GRTDNEIKNFWNTH 111 89******************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 341 aa Download sequence
MGKSACCDKN GLKKGPWTAE EDQKLIDYIQ KHGHGRWRTL PKNAELKRCG KSCRLRWTNY 60 LRPDIKRGKF SIEEEEAIIQ LHSILGNKWS AIASRLPGRT DNEIKNFWNT HIKKRLLRMG 120 IDPVTHKPRL DLLQLYSVLN SSLCNLSHQI NLSNLLGIES ILNPNLATSL LSTQSNSQDI 180 IPKNFQENQL DSSYVQNQFQ SVQPNQIQAC IDSSTQFMNE TQLLQANLEQ LSTSQTNFNC 240 QNSLQGLWQE TGKYPNMGES LMPNCAYHEI SNQAMMKCSF ENLSNLGFNS SMISTPSSST 300 TPLQSSSTTY VNGGTEDERD SNCSNILMFD IPSSLDVNGL L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G21440.1	1e-102	MYB family protein