PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021664674.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 460aa MW: 50922.4 Da PI: 8.3237

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021664674.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.3	3e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEde+l++ ++++G g+W+++++ g+ R++k+c++rw +yl XP_021664674.1 14 KGLWSPEEDEKLLRHITKYGHGCWSSVPKQAGLQRCGKSCRLRWINYL 61 678*******************************************97 PP
2	Myb_DNA-binding	44.3	4.2e-14	67	110	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg ++++E+ l++++++ lG++ W+ Ia+ ++ gRt++++k+ w++ XP_021664674.1 67 RGTFSQQEENLIIELHAVLGNR-WSQIAAQLP-GRTDNEIKNLWNS 110 899*****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 460 aa Download sequence
MGRHSCCYKQ KLRKGLWSPE EDEKLLRHIT KYGHGCWSSV PKQAGLQRCG KSCRLRWINY 60 LRPDLKRGTF SQQEENLIIE LHAVLGNRWS QIAAQLPGRT DNEIKNLWNS CLKKKLRQRG 120 IDPVTHKPLS EVENNGQDRN PTANKGQEKG SGVSSELNLL EASNSKPGPN LQEKKQSPVS 180 AQAYQLEGEG SSNSKNMSSN PNNHGNNSNL MTPISNKDFF LERFATSRHE GSTSNCQPSD 240 LVGHFPLQQL NYASNARLTT NSIPSPWFTQ TSKSLDVNSE FSSSSIPTIL PPTTSSFLST 300 SMAFKPSVTV PSDDPSLASF PISSSRFWEA GAPSNNSNSS TGSSGNAELQ SNSSFFESTI 360 FSWGLGDCSS TEKDGQSQLI GSQQVDVKWP EYLHNPLIMA AASQNQSPQS LYNEIKSETH 420 LLSQNSRSVW PQNQQQLEPF QNSDICPKDI QRLTAAYGHI

Sequence ? help Back to Top

Protein Sequence Length: 460 aa Download sequence

MGRHSCCYKQ KLRKGLWSPE EDEKLLRHIT KYGHGCWSSV PKQAGLQRCG KSCRLRWINY  60
LRPDLKRGTF SQQEENLIIE LHAVLGNRWS QIAAQLPGRT DNEIKNLWNS CLKKKLRQRG  120
IDPVTHKPLS EVENNGQDRN PTANKGQEKG SGVSSELNLL EASNSKPGPN LQEKKQSPVS  180
AQAYQLEGEG SSNSKNMSSN PNNHGNNSNL MTPISNKDFF LERFATSRHE GSTSNCQPSD  240
LVGHFPLQQL NYASNARLTT NSIPSPWFTQ TSKSLDVNSE FSSSSIPTIL PPTTSSFLST  300
SMAFKPSVTV PSDDPSLASF PISSSRFWEA GAPSNNSNSS TGSSGNAELQ SNSSFFESTI  360
FSWGLGDCSS TEKDGQSQLI GSQQVDVKWP EYLHNPLIMA AASQNQSPQS LYNEIKSETH  420
LLSQNSRSVW PQNQQQLEPF QNSDICPKDI QRLTAAYGHI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	112	118	LKKKLRQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09540.1	2e-99	MYB family protein