PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021664676.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

bHLH

Protein Properties

Length: 522aa MW: 57674 Da PI: 8.0431

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021664676.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	32	2.3e-10	381	425	6	55
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 n+ Er Rd+i +++ L+ l+P++ K++Ka++L kA+eY+k Lq XP_021664676.1 381 NQYEREGRDKIDEKMRALQALIPNC-----SKMDKASMLDKAIEYLKALQ 425 6779999***************9.....7****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 522 aa Download sequence
MADDFVELVW KNGQILMRGR SSSPSCISDS SHHSPKPQVK TSGGEIYTSK RRRLGTVNSL 60 SDFDDCLPGR KELSKHKHSV QDNCHPDHLF PGFHENNLNI FLETTRNNNT YDEYLTESQI 120 VPECKDENLR QLHEPSLQQC QDSVPISRTV ANRRQNLSSM ARLPNSNLQQ LKSGPEKNLG 180 SRNFSLFLRP GVLPKADDQH HGAIEPAGGQ SSLRVRDLES KEDTPPAGEK ALVLESPLGS 240 RGGKDFHKHP DLVAIKTDHL KQIANPLEES PPDEQSEVPV YRNAIRSKRF QDRVPDSTSS 300 LPVNTVNGNP DREKSEDQLA ADTSTCSWGA SNDLSYSSLK RKNKDKEAMA SPRENAEGDQ 360 QVPKPASARA AAKRRRPEVY NQYEREGRDK IDEKMRALQA LIPNCSKMDK ASMLDKAIEY 420 LKALQLQLQI MSLGTGFCMP PMIVPTGMQQ ATHLAHFSAM GMGVGMGMRM PMGVGYTPAI 480 FSNSAMLGLP LSQVPFIPLA GGSSATSVPV VQNINTESMN KQ

Sequence ? help Back to Top

Protein Sequence Length: 522 aa Download sequence

MADDFVELVW KNGQILMRGR SSSPSCISDS SHHSPKPQVK TSGGEIYTSK RRRLGTVNSL  60
SDFDDCLPGR KELSKHKHSV QDNCHPDHLF PGFHENNLNI FLETTRNNNT YDEYLTESQI  120
VPECKDENLR QLHEPSLQQC QDSVPISRTV ANRRQNLSSM ARLPNSNLQQ LKSGPEKNLG  180
SRNFSLFLRP GVLPKADDQH HGAIEPAGGQ SSLRVRDLES KEDTPPAGEK ALVLESPLGS  240
RGGKDFHKHP DLVAIKTDHL KQIANPLEES PPDEQSEVPV YRNAIRSKRF QDRVPDSTSS  300
LPVNTVNGNP DREKSEDQLA ADTSTCSWGA SNDLSYSSLK RKNKDKEAMA SPRENAEGDQ  360
QVPKPASARA AAKRRRPEVY NQYEREGRDK IDEKMRALQA LIPNCSKMDK ASMLDKAIEY  420
LKALQLQLQI MSLGTGFCMP PMIVPTGMQQ ATHLAHFSAM GMGVGMGMRM PMGVGYTPAI  480
FSNSAMLGLP LSQVPFIPLA GGSSATSVPV VQNINTESMN KQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	50	54	KRRRL
2	50	75	KRRRLGTVNSLSDFDDCLPGRKELSK
3	50	77	KRRRLGTVNSLSDFDDCLPGRKELSKHK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46970.1	1e-25	bHLH family protein