PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021664738.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family MYB
Protein Properties Length: 267aa    MW: 30882.6 Da    PI: 6.1528
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021664738.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding55.21.6e-172269148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT eEd ll ++v  +G g+W++ ar+ g++Rt+k+c++rw++yl
   XP_021664738.1 22 KGPWTVEEDALLTEYVSIHGEGRWNAAARCAGLKRTGKSCRLRWLNYL 69
                     79********************************************97 PP
2Myb_DNA-binding48.81.7e-1575118146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg+ T +E++l+++++ ++G++ W++Ia++++ gRt++++k++w++
   XP_021664738.1  75 RGNITLQEQLLILELHSRWGNR-WSKIAQYLP-GRTDNEIKNYWRT 118
                      7899******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 267 aa     Download sequence    
MSAQLRNYDC ATYKNEDIDL RKGPWTVEED ALLTEYVSIH GEGRWNAAAR CAGLKRTGKS  60
CRLRWLNYLR PDVRRGNITL QEQLLILELH SRWGNRWSKI AQYLPGRTDN EIKNYWRTRV  120
QKQAKQLKCD VNSKKFREAM RYIWIPRLVE RIQATSGSPT DHSTTYTSCN SHLDIPANSE  180
SVQITDPMKE WIMPEPSGTS SESLDTQVSP VSDVTEYQNG SGLYPEEESG RWVETEMGMQ  240
NNSILGGESL DSLWNQENIW FLQQQLM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G49620.11e-82MYB family protein