PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021664752.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family YABBY
Protein Properties Length: 190aa    MW: 21140.9 Da    PI: 8.3023
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021664752.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY219.69e-6831573170
           YABBY   3 vfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvs 97 
                     ++  se+vCyv+CnfCntilavsvPs+ lf++vtvrCGhC++llsvn+  + q+ + ++              ++++ nl+s +  +++ s+s+ 
  XP_021664752.1   3 LDLVSERVCYVHCNFCNTILAVSVPSSNLFNIVTVRCGHCANLLSVNMGASFQTFPLQDP-------------QSQKVNLNSEDFDKDCGSSSKC 84 
                     66789********************************************99999998885.............4444555555555555554444 PP

           YABBY  98 sekl.senedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170
                     ++    e+ d+e pr+pp irPPekrqrvPsaynrfikeeiqrikasnPdishreafs+aaknWahfP+ih gl
  XP_021664752.1  85 NKVAaFESGDHEPPRMPP-IRPPEKRQRVPSAYNRFIKEEIQRIKASNPDISHREAFSTAAKNWAHFPHIHLGL 157
                     433324678999999999.9***************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 190 aa     Download sequence    
MSLDLVSERV CYVHCNFCNT ILAVSVPSSN LFNIVTVRCG HCANLLSVNM GASFQTFPLQ  60
DPQSQKVNLN SEDFDKDCGS SSKCNKVAAF ESGDHEPPRM PPIRPPEKRQ RVPSAYNRFI  120
KEEIQRIKAS NPDISHREAF STAAKNWAHF PHIHLGLKLD GNKHAKLDHQ SFAGEGAKKS  180
NGFYEINGTL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08465.12e-75YABBY family protein