PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021664753.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family YABBY
Protein Properties Length: 188aa    MW: 20925.7 Da    PI: 8.3023
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021664753.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY213.38.3e-6631553170
           YABBY   3 vfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvs 97 
                     ++  se+vCyv+CnfCntilavsvPs+ lf++vtvrCGhC++llsvn+  + q+ + ++           +     + nl+s +  +++ s+s+ 
  XP_021664753.1   3 LDLVSERVCYVHCNFCNTILAVSVPSSNLFNIVTVRCGHCANLLSVNMGASFQTFPLQDP----------Q-----KVNLNSEDFDKDCGSSSKC 82 
                     66789************************************************9999985..........2.....2333333333333333333 PP

           YABBY  98 sekl.senedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170
                     ++    e+ d+e pr+pp irPPekrqrvPsaynrfikeeiqrikasnPdishreafs+aaknWahfP+ih gl
  XP_021664753.1  83 NKVAaFESGDHEPPRMPP-IRPPEKRQRVPSAYNRFIKEEIQRIKASNPDISHREAFSTAAKNWAHFPHIHLGL 155
                     3222146788999**999.9***************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 188 aa     Download sequence    
MSLDLVSERV CYVHCNFCNT ILAVSVPSSN LFNIVTVRCG HCANLLSVNM GASFQTFPLQ  60
DPQKVNLNSE DFDKDCGSSS KCNKVAAFES GDHEPPRMPP IRPPEKRQRV PSAYNRFIKE  120
EIQRIKASNP DISHREAFST AAKNWAHFPH IHLGLKLDGN KHAKLDHQSF AGEGAKKSNG  180
FYEINGTL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08465.12e-74YABBY family protein