PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021664920.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

HD-ZIP

Protein Properties

Length: 290aa MW: 33021 Da PI: 6.3508

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021664920.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	56	6.5e-18	83	136	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k+++++ eq+++Le+ Fe +++ e++ +LA+ lgL+ rq+ +WFqNrRa++k XP_021664920.1 83 KKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWK 136 456899***********************************************9 PP
2	HD-ZIP_I/II	129.2	1.7e-41	82	172	1	91
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 ekkrrl+ eqvk+LE++Fe +kLeperK++lar+Lglqprq+a+WFqnrRAR+ktkqlEkdy+ Lkr+++a+k+en++L++++++L++e+ XP_021664920.1 82 EKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYDLLKRQFEAIKAENDALQAQNQKLHAEI 172 69**************************************************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 290 aa Download sequence
MTCNGMAFFP ANFMLQTPHE EDHHQPPTSL NPILPSCTPQ EFHGVASFLG KRSMSFSGID 60 ASCHEEANGE DELSDDGSQA GEKKRRLNME QVKTLEKNFE LGNKLEPERK MQLARALGLQ 120 PRQIAIWFQN RRARWKTKQL EKDYDLLKRQ FEAIKAENDA LQAQNQKLHA EILALKSREP 180 TESINLNKET EGSCSNRSEN SSEIKLDISR TPAIDSPLSN HPTSRTLFPS SSIRPTGVAQ 240 LFQNSSSRPD HIHCQKNIDQ MVKEESLSNM FCGIDEQSAF WPWLEQQHFN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	131	139	RRARWKTKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69780.1	1e-127	HD-ZIP family protein