PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021665221.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family MIKC_MADS
Protein Properties Length: 234aa    MW: 27457.4 Da    PI: 7.917
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021665221.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF84.85.2e-27959151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    krien++ rqvtfskRr+g+lKK +ELSvLCda++ +iifsstgk+  y++
  XP_021665221.1  9 KRIENQTTRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSTGKMCQYCT 59
                    79**********************************************986 PP
2K-box72.71.1e-24811701099
           K-box  10 eeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 
                     e+   e+l  ela L+ke++ Lq + R++ Ged++s+ ++eL +Leq+Le+s+ k+R++Knell +q+++l++ke++l+een ++ + ++
  XP_021665221.1  81 EHDSREQLFSELAMLRKETRRLQLNMRRYTGEDMSSIPFEELSELEQELERSVAKVRDRKNELLQQQLDNLRRKERMLEEENGNMYRWIQ 170
                     4555778899************************************************************************99877665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    
MGRGKIPIKR IENQTTRQVT FSKRRAGLLK KTHELSVLCD AQIGLIIFSS TGKMCQYCTE  60
PLRMEQIIER YQKITGTCIP EHDSREQLFS ELAMLRKETR RLQLNMRRYT GEDMSSIPFE  120
ELSELEQELE RSVAKVRDRK NELLQQQLDN LRRKERMLEE ENGNMYRWIQ EHRVALEYQQ  180
ATLEAKPMEH QQVLDQFPFC GEPSSVLQLA TIPSQIHHSY HLQLAQPSLQ GSNV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G23260.21e-90MIKC_MADS family protein