PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021665285.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

C2H2

Protein Properties

Length: 288aa MW: 32430.3 Da PI: 7.9955

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021665285.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	10.7	0.0017	110	123	1	14
EEETTTTEEESSHH CS zf-C2H2 1 ykCpdCgksFsrks 14 ++C C+k+F+r XP_021665285.1 110 FSCAVCNKTFNRYN 123 89********9865 PP
2	zf-C2H2	16.5	2.4e-05	195	217	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C +Cgk+F + + ++H +++ XP_021665285.1 195 FRCRKCGKPFAVRGDWRTHEKNC 217 89*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 288 aa Download sequence
MQTPSFTYIS SSESVCIEVD VQKVDEDSLF LSLRPPGQSI TKRPNYRPRL NQKQQIEENA 60 TSESGVTVAL HRGPPTAGAS TSNPNHIGSL VEGQYWIPSP AQILVGPTQF SCAVCNKTFN 120 RYNIMQMHMW GRGSQFRKGP ESLRGAKQAS SMLRLPCYCC AEGCKNNIEH PRSRPLKDFR 180 TLQTHYKRKH GAKPFRCRKC GKPFAVRGDW RTHEKNCGKS WFCICGTDFK HKRSLKDHVR 240 AFGDGHAPHT VEDCEVEEEQ EKEEEGDDDD ENNVDQGDNG GGHGPVFF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G13290.1	1e-117	C2H2 family protein