PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021665933.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family MIKC_MADS
Protein Properties Length: 220aa    MW: 25914.7 Da    PI: 7.5784
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021665933.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF89.41.8e-281059251
                    ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    rien snrqvt+skRrngi+KKA+E+ vLCda+v+++if+s+gk++ey+s
  XP_021665933.1 10 RIENPSNRQVTYSKRRNGIMKKAKEITVLCDAQVSLVIFASSGKMHEYCS 59
                    8***********************************************96 PP
2K-box72.99.1e-2571144173
           K-box   1 yqkssgks.leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnell 73 
                     y+k+sgks l++ak+e l++e++++kke++n+q e+Rhl+Ged++sL ++eL  +e++Lek+l +iR+k+ +l+
  XP_021665933.1  71 YHKQSGKSrLWDAKHEDLSNEIDRIKKENDNMQIELRHLKGEDITSLHHEELGVIEEALEKGLATIRDKQANLI 144
                     789999999*************************************************************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    
MGRGKIEIRR IENPSNRQVT YSKRRNGIMK KAKEITVLCD AQVSLVIFAS SGKMHEYCSP  60
STTLIDMLDK YHKQSGKSRL WDAKHEDLSN EIDRIKKEND NMQIELRHLK GEDITSLHHE  120
ELGVIEEALE KGLATIRDKQ ANLICYLPQS YCFSNYIQEK ILEDMNKRLS FILQQQEMAI  180
EENMREMENP YHQQRVRDYN SQMPFALRVQ PIQPNLQERM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G20240.12e-83MIKC_MADS family protein