PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021665987.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

LBD

Protein Properties

Length: 260aa MW: 29575 Da PI: 7.0819

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021665987.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	123.7	9.1e-39	10	110	1	101
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 aCaaCk+ rrkC+++C+lapyf +qpk f+n+hklFG+sn+lk+lk+l++ ++e+am+s++y++++r + Pv+G+ g+i +l+ q++q+++el+ XP_021665987.1 10 ACAACKYRRRKCSSKCPLAPYFLPDQPKLFQNAHKLFGVSNILKILKNLEPRQKEEAMRSIIYQSNIRDKFPVHGCWGIICQLHYQIRQAEEELH 104 7******************************************************************************************** PP DUF260 96 llkeel 101 +++++l XP_021665987.1 105 AVHSQL 110 9985 PP

Sequence ? help Back to Top
Protein Sequence Length: 260 aa Download sequence
MTLKGGTSQA CAACKYRRRK CSSKCPLAPY FLPDQPKLFQ NAHKLFGVSN ILKILKNLEP 60 RQKEEAMRSI IYQSNIRDKF PVHGCWGIIC QLHYQIRQAE EELHAVHSQL DMYKQYQQHQ 120 ISSLTDDAPS QLELGMATPS NALSIFGHPT TPQPYNAVTT SPVTQQHSYS NSNNAGYSCG 180 YLDSKDHLGN SWWVQHTYAT TNNNNNNNTN PMAIQSQLVA SQPLAIQQEV VQDYDEIHPF 240 FDTIDDRQSY IDSKEAYESR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47870.1	7e-62	LBD family protein