PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021666053.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

Nin-like

Protein Properties

Length: 935aa MW: 104307 Da PI: 7.1731

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021666053.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	93.8	1.2e-29	614	665	1	52
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek i+l++l++yF++++kdAAk++gvc+T+LKriCRq+GIkRWP+Rkik++ XP_021666053.1 614 AEKAITLQVLQQYFAGSLKDAAKSIGVCPTTLKRICRQHGIKRWPSRKIKKV 665 5899**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 935 aa Download sequence
MEDRNLSPGP MLGAYADSAM DIEYMDKLLL EGCWLETIDG SEFFNTSPSS SAALVDASFL 60 WSTSEISNVD LASSTSQRSN QDDEHTSLLP TNSSSNEARG RSLVNVQAHG HDIRSANRLE 120 NNRNEASEAS KSWWIGPRTS PGPKTSVRDR LIRALGYIKD FTKDKDILIQ IWVPVDRGGR 180 RVLTTHDQRF ALVPNCQRLA NYRHISVNYQ FSAEEDSKDM VGLPGRVFLG KVPEWTPDVR 240 FFRSDEYPRV DHAQLYDVRG TLALPVFEQG SRTCLGVIEV VMTKQKIKYH PELESICKAL 300 KAVDLQSSEV PSLQHVKACD MSYQAVLPEI HEVLRSACET HKLPLAQTWV PCIQQGKAGC 360 RHSAENYHHC VSTVDLACYV RDTGVQAFHE ACSEHHLLKG QGVAGEAFLT NQPCFTSDIT 420 SYGKTEYPLS HHARMFGLHA AVAIRLRSVH TGRADFVLEF FLPADCTDPE KQKKMLTSLS 480 IIIQQVCRSL RVIADKELEE TDLPISEVLA PSYGTPPREE MLRVTQPNSE SYGGDHLSWS 540 DRFTGIQQSG SVVSSCQEEK QKVLIHKNSV GRRQNQEDYS LKVSVECGGD SAVAEGSFSS 600 VCVGRTREKR RTRAEKAITL QVLQQYFAGS LKDAAKSIGV CPTTLKRICR QHGIKRWPSR 660 KIKKVGHSLK KLQVVIDSVE GASGAFQIDS FYTKFPELAS SNLSRSNPFS TSKQLDHPES 720 SSIQPEGGIF RSQVTAPKSP SSSCSQSSSS SHCFSSGTQQ HASAFTIPTS RDPMLGENSG 780 NCVLKRVRSD AELHASIQAE QNLLPRSRSH KSLCEQPDLG KLPPLAKKSN RISQEIDAQR 840 VKVTCGNEKI RFRMPNNWEL EDLLQEIARR FNIDDIHKYD LKYLDDDSDW VLLTCDDDLK 900 ECIDICQSSQ SYTIKLLLQI SPCLLDGSMK SRDLS

Sequence ? help Back to Top

Protein Sequence Length: 935 aa Download sequence

MEDRNLSPGP MLGAYADSAM DIEYMDKLLL EGCWLETIDG SEFFNTSPSS SAALVDASFL  60
WSTSEISNVD LASSTSQRSN QDDEHTSLLP TNSSSNEARG RSLVNVQAHG HDIRSANRLE  120
NNRNEASEAS KSWWIGPRTS PGPKTSVRDR LIRALGYIKD FTKDKDILIQ IWVPVDRGGR  180
RVLTTHDQRF ALVPNCQRLA NYRHISVNYQ FSAEEDSKDM VGLPGRVFLG KVPEWTPDVR  240
FFRSDEYPRV DHAQLYDVRG TLALPVFEQG SRTCLGVIEV VMTKQKIKYH PELESICKAL  300
KAVDLQSSEV PSLQHVKACD MSYQAVLPEI HEVLRSACET HKLPLAQTWV PCIQQGKAGC  360
RHSAENYHHC VSTVDLACYV RDTGVQAFHE ACSEHHLLKG QGVAGEAFLT NQPCFTSDIT  420
SYGKTEYPLS HHARMFGLHA AVAIRLRSVH TGRADFVLEF FLPADCTDPE KQKKMLTSLS  480
IIIQQVCRSL RVIADKELEE TDLPISEVLA PSYGTPPREE MLRVTQPNSE SYGGDHLSWS  540
DRFTGIQQSG SVVSSCQEEK QKVLIHKNSV GRRQNQEDYS LKVSVECGGD SAVAEGSFSS  600
VCVGRTREKR RTRAEKAITL QVLQQYFAGS LKDAAKSIGV CPTTLKRICR QHGIKRWPSR  660
KIKKVGHSLK KLQVVIDSVE GASGAFQIDS FYTKFPELAS SNLSRSNPFS TSKQLDHPES  720
SSIQPEGGIF RSQVTAPKSP SSSCSQSSSS SHCFSSGTQQ HASAFTIPTS RDPMLGENSG  780
NCVLKRVRSD AELHASIQAE QNLLPRSRSH KSLCEQPDLG KLPPLAKKSN RISQEIDAQR  840
VKVTCGNEKI RFRMPNNWEL EDLLQEIARR FNIDDIHKYD LKYLDDDSDW VLLTCDDDLK  900
ECIDICQSSQ SYTIKLLLQI SPCLLDGSMK SRDLS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G20640.2	0.0	Nin-like family protein