PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021666317.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

LBD

Protein Properties

Length: 167aa MW: 17832.8 Da PI: 5.8646

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021666317.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	42.6	1.7e-13	69	118	1	50
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalp 50 +CaaC v+++ C+++C +a y+p ++++kf +v+ +FG+ n++++l++ + XP_021666317.1 69 PCAACIVHGQICTDKCYVASYIPPTDSHKFTVVNGIFGTPNIVSFLQNNN 118 7*********************************************9865 PP

Sequence ? help Back to Top
Protein Sequence Length: 167 aa Download sequence
MGNNDHDCSP FLFSSPPYAP LSSPSYSLSS SPPLSPSPDS PFESSSSLPL HTTQSSSSSF 60 HPSAANLGPC AACIVHGQIC TDKCYVASYI PPTDSHKFTV VNGIFGTPNI VSFLQNNNSS 120 SYVPLLLLLR DTTTQDGELK QTSTQEHLKV LSAASNGDRL VYVMFQT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28500.1	8e-15	LBD family protein