PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021666519.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

HB-PHD

Protein Properties

Length: 731aa MW: 82590 Da PI: 10.1376

Description

HB-PHD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021666519.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	33.2	8.7e-11	508	552	9	53
HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHH CS Homeobox 9 keqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRa 53 ++ +e L ++F++n ps++ +e L+k+lgL+ +V+ WF+N R+ XP_021666519.1 508 PSAVEKLRQVFAENELPSRTVKENLSKELGLDPGKVSKWFKNARY 552 67899**************************************97 PP
2	PHD	35.9	1.7e-12	238	292	1	50
SBTTTSSTCT..TSSEEEBS.SSSSEEETTTSTSSSSHHSHHSS..TBSSHHHHT CS PHD 1 rCkvCgksde..egelvlCd.gCkewfHlkClglkleseekpeg..ewlCeeCke 50 +C+ C++++ ++++vlCd +C+ +fH+kCl+++l+++++p g w+C+ C++ XP_021666519.1 238 FCAKCKSNEVfpDNDIVLCDgTCNCAFHQKCLDPPLDTANIPPGdqGWFCKFCEC 292 6999944345****56****************9999*****97 PP

Sequence ? help Back to Top
Protein Sequence Length: 731 aa Download sequence
MRGAGKKVMH QESGKSSFSK TENGSMLIAS LKLKKDSKIS HCKKHKPKSK SKSHLKAVGA 60 NLLKSTVTDP SSKGIRNDST SKKLISRKIL KKAHEPKKLA SSKPRGKHSS VIASEENGKN 120 ANREVTFKNL NKKKNKRRRK EKAELDEPSR MQRRARYLLI KMKLEQNLID AYSGEGWKGQ 180 SREKIKPEKE LLRAKKQILK CKLGIRDTIH QLDSLSRVGC IEDSVMAPDG SVSHEHIFCA 240 KCKSNEVFPD NDIVLCDGTC NCAFHQKCLD PPLDTANIPP GDQGWFCKFC ECRMEIIEAM 300 NAHLGTQFSV SGCWQDIFKE AANFSDGGSM LLNPEQEWPS DDSEDDDYDP ERRENSISGA 360 GTDDDASDDA SSSTSLGWSS DGEVFSGSRK WEMESTDFRN QSIYSSLDSD ETSDEEIMCG 420 PRKRRAVDYK KLYDEMFGKD APAYEQVSED EDWGPGKRKR REKESDAAST LMTLYESEKK 480 CKKVETIDVK RKLSRDSQVR RPFFRIPPSA VEKLRQVFAE NELPSRTVKE NLSKELGLDP 540 GKVSKWFKNA RYLALKSRKA GRAKELRNSS RKISRPRLDN MKDKTADIVE LNNASMETSI 600 CSPKNSQQVL QRKEPKSLSS SLVKNERKRA SIGSPSKSNK ISVEYSDDVS LKKLLKSKTK 660 RGKKRNNSIS VTLSQVAEAE MERLCRAKVR LENMKQTLLG LQIGKSRKSN KNQLHQESVI 720 FVPIAEIREK I

Sequence ? help Back to Top

Protein Sequence Length: 731 aa Download sequence

MRGAGKKVMH QESGKSSFSK TENGSMLIAS LKLKKDSKIS HCKKHKPKSK SKSHLKAVGA  60
NLLKSTVTDP SSKGIRNDST SKKLISRKIL KKAHEPKKLA SSKPRGKHSS VIASEENGKN  120
ANREVTFKNL NKKKNKRRRK EKAELDEPSR MQRRARYLLI KMKLEQNLID AYSGEGWKGQ  180
SREKIKPEKE LLRAKKQILK CKLGIRDTIH QLDSLSRVGC IEDSVMAPDG SVSHEHIFCA  240
KCKSNEVFPD NDIVLCDGTC NCAFHQKCLD PPLDTANIPP GDQGWFCKFC ECRMEIIEAM  300
NAHLGTQFSV SGCWQDIFKE AANFSDGGSM LLNPEQEWPS DDSEDDDYDP ERRENSISGA  360
GTDDDASDDA SSSTSLGWSS DGEVFSGSRK WEMESTDFRN QSIYSSLDSD ETSDEEIMCG  420
PRKRRAVDYK KLYDEMFGKD APAYEQVSED EDWGPGKRKR REKESDAAST LMTLYESEKK  480
CKKVETIDVK RKLSRDSQVR RPFFRIPPSA VEKLRQVFAE NELPSRTVKE NLSKELGLDP  540
GKVSKWFKNA RYLALKSRKA GRAKELRNSS RKISRPRLDN MKDKTADIVE LNNASMETSI  600
CSPKNSQQVL QRKEPKSLSS SLVKNERKRA SIGSPSKSNK ISVEYSDDVS LKKLLKSKTK  660
RGKKRNNSIS VTLSQVAEAE MERLCRAKVR LENMKQTLLG LQIGKSRKSN KNQLHQESVI  720
FVPIAEIREK I

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	136	163	KRRRKEKAELDEPSRMQRRARYLLIKMK
2	137	164	KRRRKEKAELDEPSRMQRRARYLLIKMK
3	137	142	RRRKEK
4	457	483	KRKRREKESDAASTLMTLYESEKKCKK
5	458	463	RRRKEK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29940.2	4e-93	HB-PHD family protein